RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-241	ENST00000593048	RIIAD1	A6NNX1	92 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	PHYH	O14832	338 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	TBX1	O43435	398 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	SPRY1	O43609	319 aa	Predicted RBP	13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	GRP	P07492	148 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	SLC2A1	P11166	492 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	SPI1	P17947	270 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	POU1F1	P28069	291 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	GRK5	P34947	590 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	SLC15A1	P46059	708 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	MZT1	Q08AG7	82 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	WDR25	Q64LD2	544 aa	Predicted RBP	13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	SPATC1	Q76KD6	591 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	SPERT	Q8NA61	448 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	OR4Q3	Q8NH05	313 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	OTULIN	Q96BN8	352 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	UPRT	Q96BW1	309 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	ZNF48	Q96MX3	618 aa	Predicted RBP	13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	OPA3	Q9H6K4	179 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	MRPS18A	Q9NVS2	196 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	MRPL15	Q9P015	296 aa	Known RBP	13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	ERVK-18	Q9QC07	812 aa		13.47	□□□□□ -0.25
CIRBP-241	ENST00000593048	TRAV40	A0A0B4J280	105 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048		A6NLC8	198 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	ZNF878	C9JN71	531 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	C3orf80	F5H4A9	247 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	XRCC2	O43543	280 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	ENSA	O43768	121 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	CLU	P10909	449 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	ZNF3	P17036	446 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	HSD11B1	P28845	292 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	OTX1	P32242	354 aa	Predicted RBP	13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	NPY4R	P50391	375 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	BLVRA	P53004	296 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	SLC25A1	P53007	311 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	GRB2	P62993	217 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	EIF2B1	Q14232	305 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	TBCE	Q15813	527 aa	Predicted RBP	13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	KLHL22	Q53GT1	634 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	TEX30	Q5JUR7	227 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	SATL1	Q86VE3	508 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	PLPP7	Q8NBV4	271 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	OR56B2P	Q8NGI1	322 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	TMEM163	Q8TC26	289 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	CDCA4	Q9BXL8	241 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	RBM38	Q9H0Z9	239 aa	Known RBP	13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	TRIM36	Q9NQ86	728 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	C14orf119	Q9NWQ9	140 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	C1orf123	Q9NWV4	160 aa		13.46	□□□□□ -0.25
CIRBP-241	ENST00000593048	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.46	□□□□□ -0.25	4e-8	■■■□□ 15.2
CIRBP-241	ENST00000593048	TRAV38-1	A0A0B4J264	116 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	hCG_1807616	A0A1W2PRN6	198 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	ANKRD30BL	A7E2S9	258 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	PTGES3L	E9PB15	166 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	LGALS8	O00214	317 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	CDK1	P06493	297 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	ANXA2	P07355	339 aa	Known RBP	13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	PSKH1	P11801	424 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	EGR1	P18146	543 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	TMBIM6	P55061	237 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	FGF12	P61328	243 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	SNAPC1	Q16533	368 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	TIGD6	Q17RP2	521 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	CD276	Q5ZPR3	534 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	OR13F1	Q8NGS4	319 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	OR8S1	Q8NH09	359 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	RORB	Q92753	470 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	ZDHHC16	Q969W1	377 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	SP140L	Q9H930	580 aa		13.45	□□□□□ -0.26
CIRBP-241	ENST00000593048	C5orf63	A6NC05	138 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	PRODH	O43272	600 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	ADAM20	O43506	726 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	NDUFA2	O43678	99 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	PLAT	P00750	562 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	APOC1	P02654	83 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	RNASE1	P07998	156 aa	Known RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	DDOST	P39656	456 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	PSMB10	P40306	273 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	CX3CR1	P49238	355 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	HOXA4	Q00056	320 aa	Predicted RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	SLC9A3R2	Q15599	337 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	PCK2	Q16822	640 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	TUSC1	Q2TAM9	212 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	SYT6	Q5T7P8	510 aa	Predicted RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	GPR157	Q5UAW9	335 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	UBE2U	Q5VVX9	321 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	XAF1	Q6GPH4	301 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	ZNF841	Q6ZN19	808 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	C9orf139	Q6ZV77	190 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	ERI1	Q8IV48	349 aa	Known RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	OR6N2	Q8NGY6	317 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	MUL1	Q969V5	352 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	DACT3	Q96B18	629 aa	Predicted RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	C1orf147	Q96MC9	270 aa	Predicted RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	INTS14	Q96SY0	518 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	PCGF1	Q9BSM1	259 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	ZNF747	Q9BV97	191 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	NMNAT2	Q9BZQ4	307 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	CMC2	Q9NRP2	79 aa		13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	TVP23B	Q9NYZ1	205 aa		13.44	□□□□□ -0.26

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