RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 AMY2BP19961 511 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 GNALP38405 381 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 NPY4RP50391 375 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 ACTR3P61158 418 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 IL5RAQ01344 420 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 POU4F2Q12837 409 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 KCNJ8Q15842 424 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 DUX4L9Q6RFH8 374 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-239ENST00000592467 BTNL3Q6UXE8 466 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 C9orf139Q6ZV77 190 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 DOK3Q7L591 496 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 SLC35F2Q8IXU6 374 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 PYDC1Q8WXC3 89 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 PKP2Q99959 881 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 MROQ9BYG7 248 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 PBOV1Q9GZY1 135 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 RASSF4Q9H2L5 321 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 TRIM36Q9NQ86 728 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 DUX4Q9UBX2 424 aa16.74■□□□□ 0.27
CIRBP-239ENST00000592467 SRRM5B3KS81 715 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 CDIPTO14735 213 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 CIB2O75838 187 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 TTRP02766 147 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 FPR2P25090 351 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 SNCBQ16143 134 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 SSX6Q7RTT6 188 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 FGFRL1Q8N441 504 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 SIGLECL1Q8N7X8 197 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 APOL4Q9BPW4 351 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 MICU1Q9BPX6 476 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 ERVK-18Q9QC07 812 aa16.73■□□□□ 0.27
CIRBP-239ENST00000592467 NUFIP1Q9UHK0 495 aaKnown RBP16.73■□□□□ 0.27
CIRBP-239ENST00000592467 MRM2Q9UI43 246 aaKnown RBP16.73■□□□□ 0.27
CIRBP-239ENST00000592467 SAC3D1A6NKF1 404 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 MMP9P14780 707 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 MUC1P15941 1255 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-239ENST00000592467 RIDAP52758 137 aaKnown RBP16.72■□□□□ 0.27
CIRBP-239ENST00000592467 CXCR4P61073 352 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 FGF12P61328 243 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 KPNB1Q14974 876 aaKnown RBP16.72■□□□□ 0.27
CIRBP-239ENST00000592467 ZNF322Q6U7Q0 402 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-239ENST00000592467 GID4Q8IVV7 300 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 FTMTQ8N4E7 242 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 OR51E1Q8TCB6 317 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 PIGCQ92535 297 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 RPL3LQ92901 407 aaKnown RBP16.72■□□□□ 0.27
CIRBP-239ENST00000592467 TECTBQ96PL2 329 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 JMJD8Q96S16 334 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 MNTQ99583 582 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 RTL8AQ9BWD3 113 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 ABCB9Q9NP78 766 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 GPR84Q9NQS5 396 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 CLN6Q9NWW5 311 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 ENOPH1Q9UHY7 261 aa16.72■□□□□ 0.27
CIRBP-239ENST00000592467 IGHV3OR16-10A0A075B7F0 116 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 ZNF816-ZNF321PA0A0X1KG74 233 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 TMEM89A2RUT3 159 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 TMEM210A6NLX4 147 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 ANXA2P2A6NMY6 339 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 TRIM77I1YAP6 450 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 ENSAO43768 121 aaKnown RBP16.71■□□□□ 0.27
CIRBP-239ENST00000592467 MAP2K3P46734 347 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 COMPP49747 757 aaPredicted RBP16.71■□□□□ 0.27
CIRBP-239ENST00000592467 UBA52P62987 128 aaKnown RBP16.71■□□□□ 0.27
CIRBP-239ENST00000592467 WDR38Q5JTN6 314 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 ZNF684Q5T5D7 378 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 Q6ZSR3 168 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 ZDHHC23Q8IYP9 409 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 SCCPDHQ8NBX0 429 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 OR10Z1Q8NGY1 313 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 ITFG2Q969R8 447 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 WDR13Q9H1Z4 485 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 H2AFY2Q9P0M6 372 aaPredicted RBP16.71■□□□□ 0.27
CIRBP-239ENST00000592467 IKZF2Q9UKS7 526 aa16.71■□□□□ 0.27
CIRBP-239ENST00000592467 TRAV40A0A0B4J280 105 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 A0A1B0GTI1 187 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 DVL1O14640 695 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 ALPLP05186 524 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 HTR1FP30939 366 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 EGR3Q06889 387 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 ZNF829Q3KNS6 432 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-239ENST00000592467 STUMQ69YW2 141 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 PLEKHG7Q6ZR37 379 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 OR51G2Q8NGK0 314 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 C12orf43Q96C57 262 aaKnown RBP16.7■□□□□ 0.26
CIRBP-239ENST00000592467 RNF170Q96K19 258 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 CCL13Q99616 98 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 RBM4BQ9BQ04 359 aaKnown RBP16.7■□□□□ 0.26
CIRBP-239ENST00000592467 OR51I2Q9H344 312 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 RIBC2Q9H4K1 309 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 WARS2Q9UGM6 360 aaKnown RBP16.7■□□□□ 0.26
CIRBP-239ENST00000592467 R4GMQ9 66 aa16.7■□□□□ 0.26
CIRBP-239ENST00000592467 TMPRSS2O15393 492 aa16.69■□□□□ 0.26
CIRBP-239ENST00000592467 SFTPBP07988 381 aa16.69■□□□□ 0.26
CIRBP-239ENST00000592467 TGM4P49221 684 aa16.69■□□□□ 0.26
CIRBP-239ENST00000592467 MICBQ29980 383 aa16.69■□□□□ 0.26
CIRBP-239ENST00000592467 CEACAM21Q3KPI0 293 aa16.69■□□□□ 0.26
CIRBP-239ENST00000592467 DMRTC1Q5HYR2 192 aa16.69■□□□□ 0.26
CIRBP-239ENST00000592467 ATPAF1Q5TC12 328 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms