RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MARS2Q96GW9 593 aaKnown RBP19.13■□□□□ 0.65
ATG4D-209ENST00000588857 WDFY2Q96P53 400 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 PSMG3-AS1Q96PY0 264 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 SPATA2Q9UM82 520 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 CST4P01036 141 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 BMP4P12644 408 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 PRF1P14222 555 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 SELEP16581 610 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 PEX19P40855 299 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 P2RY14Q15391 338 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 CDSNQ15517 529 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 DMRTC1Q5HYR2 192 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 PLCXD3Q63HM9 321 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 MOB3CQ70IA8 216 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 BHLHE23Q8NDY6 225 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 LGALS14Q8TCE9 139 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 KLF14Q8TD94 323 aaPredicted RBP19.12■□□□□ 0.65
ATG4D-209ENST00000588857 UBASH3BQ8TF42 649 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 SPACA5Q96QH8 159 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 GPER1Q99527 375 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 NKX3-1Q99801 234 aaPredicted RBP19.12■□□□□ 0.65
ATG4D-209ENST00000588857 MIXL1Q9H2W2 232 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 AKIP1Q9NQ31 210 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 SLC7A11Q9UPY5 501 aa19.12■□□□□ 0.65
ATG4D-209ENST00000588857 HECTD1Q9ULT8 2610 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 WIPF3A6NGB9 483 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 ZNF850A8MQ14 1090 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 INHBBP09529 407 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 RANBP1P43487 201 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 SCAND1P57086 179 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 SORDQ00796 357 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 SNTB2Q13425 540 aaKnown RBP19.11■□□□□ 0.65
ATG4D-209ENST00000588857 ZNF718Q3SXZ3 478 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 FAM166AQ6J272 317 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 XKRXQ6PP77 449 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 LYPD6Q86Y78 171 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 OR5H6Q8NGV6 325 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 HAVCR1Q96D42 359 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 CPNE2Q96FN4 548 aaPredicted RBP19.11■□□□□ 0.65
ATG4D-209ENST00000588857 DIRAS2Q96HU8 199 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 RADILQ96JH8 1075 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 WDR12Q9GZL7 423 aaKnown RBP19.11■□□□□ 0.65
ATG4D-209ENST00000588857 CNTD2Q9H8S5 307 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 HCFC1P51610 2035 aa19.11■□□□□ 0.65
ATG4D-209ENST00000588857 FAM25AB3EWG3 89 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 FAM25CB3EWG5 89 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 FAM25GB3EWG6 89 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ATP6V1G2-DDX39BF2Z307 99 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ZG16O60844 167 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 RNF224P0DH78 156 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 AGAP20933 346 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 GCH1P30793 250 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 CAPZA1P52907 286 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 PRDX4Q13162 271 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ZNF846Q147U1 533 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 KISS1Q15726 138 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 KRT74Q7RTS7 529 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 CCDC190Q86UF4 302 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 PNLDC1Q8NA58 520 aaKnown RBP19.1■□□□□ 0.65
ATG4D-209ENST00000588857 OR51D1Q8NGF3 324 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 FAM3DQ96BQ1 224 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 OR5V1Q9UGF6 321 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ETV7Q9Y603 341 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 DOPEY2Q9Y3R5 2298 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 FAM230AA0A1W2PPH8 454 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ARSBP15848 533 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ZNF45Q02386 682 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 PSG7Q13046 419 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 RIN1Q13671 783 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 RGS7BPQ6MZT1 257 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-209ENST00000588857 LRRC28Q86X40 367 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ZDHHC23Q8IYP9 409 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 ZNF808Q8N4W9 903 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-209ENST00000588857 OR4D6Q8NGJ1 314 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 SLC25A28Q96A46 364 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 BORCS8Q96FH0 119 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 HIST1H2AAQ96QV6 131 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 PPP1R3EQ9H7J1 279 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 MRPL15Q9P015 296 aaKnown RBP19.1■□□□□ 0.65
ATG4D-209ENST00000588857 GPR160Q9UJ42 338 aa19.1■□□□□ 0.65
ATG4D-209ENST00000588857 DPRXA6NFQ7 191 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 CLDN14O95500 239 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 ELK1P19419 428 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 GRNP28799 593 aaKnown RBP19.09■□□□□ 0.65
ATG4D-209ENST00000588857 MPV17P39210 176 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 ETV6P41212 452 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 FABP6P51161 128 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 FUT6P51993 359 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 MTCP1P56278 107 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 RPS23P62266 143 aaKnown RBP19.09■□□□□ 0.65
ATG4D-209ENST00000588857 C2orf76Q3KRA6 126 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 UBE2NLQ5JXB2 153 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 LHFPL2Q6ZUX7 228 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-209ENST00000588857 MFSD4AQ8N468 514 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 CMTM3Q96MX0 182 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 MPC1Q9Y5U8 109 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 PTPN13Q12923 2485 aa19.09■□□□□ 0.65
ATG4D-209ENST00000588857 LOC100289279A0A1B0GTE1 492 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 ABCD4O14678 606 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms