RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SCAMP2O15127 329 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 KALRNO60229 2985 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 FCMRO60667 390 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NIPSNAP2O75323 286 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CLPXO76031 633 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PSMG1O95456 288 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SNRPCP09234 159 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 COX5BP10606 129 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 COX6A1P12074 109 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CD99P14209 185 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 HPGDP15428 266 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SELEP16581 610 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ME2P23368 584 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CFL1P23528 166 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 FASP25445 335 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 BMI1P35226 326 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 EVX1P49640 407 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 RGS6P49758 472 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 LIM2P55344 173 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GPX6P59796 221 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 COPZ1P61923 177 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CSNK2BP67870 215 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 MRPS11P82912 194 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 EWSR1Q01844 656 aaKnown RBP eCLIP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C2orf54Q08AI8 447 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 AQP6Q13520 282 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NRF1Q16656 503 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CYP51A1Q16850 503 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM30BQ3MIR4 351 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CYBRD1Q53TN4 286 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C6orf183Q5T699 404 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZFP1Q6P2D0 407 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF562Q6V9R5 426 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C16orf82Q7Z2V1 217 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C6orf120Q7Z4R8 191 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GABRG1Q8N1C3 465 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2T33Q8NG76 320 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR10G7Q8NGN6 311 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR6K2Q8NGY2 324 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR6K3Q8NGY3 331 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2G2Q8NGZ5 317 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C8orf46Q8TAG6 207 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF519Q8TB69 540 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 HPSE2Q8WWQ2 592 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NEURL3Q96EH8 262 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ARL5BQ96KC2 179 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CAPZA3Q96KX2 299 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PAIP2Q9BPZ3 127 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC30A2Q9BRI3 323 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OSBPL11Q9BXB4 747 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 UGT2B28Q9BY64 529 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 Q9HAA7 133 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ADGRL4Q9HBW9 690 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SLCO1B3Q9NPD5 702 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ACER3Q9NUN7 267 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 AIG1Q9NVV5 245 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PIPOXQ9P0Z9 390 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SAMD4AQ9UPU9 718 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 MOB4Q9Y3A3 225 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 WIF1Q9Y5W5 379 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 COMMD3-BMI1R4GMX3 469 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZFC3H1O60293 1989 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF587BE7ETH6 402 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CLOCKO15516 846 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ERI3O43414 337 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TYROBPO43914 113 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 MPZL2O60487 215 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 WISP2O76076 250 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 AQP8O94778 261 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 LGI1O95970 557 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C1QAP02745 245 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SERPINA5P05154 406 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP6V1B2P21281 511 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GLRA1P23415 457 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 LAP3P28838 519 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 FGF9P31371 208 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZFP36L2P47974 494 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CDK9P50750 372 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 P2RX1P51575 399 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 VSX2P58304 361 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PCBD1P61457 104 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SEMG2Q02383 582 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 Q0VFX4 171 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZP4Q12836 540 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SRSF9Q13242 221 aaKnown RBP eCLIP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SLAMF1Q13291 335 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CAPRIN1Q14444 709 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TSNQ15631 228 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SFT2D3Q587I9 215 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NFE4Q86UQ8 179 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GTPBP8Q8N3Z3 284 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF781Q8N8C0 355 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NFAM1Q8NET5 270 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4F15Q8NGB8 312 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR10A7Q8NGE5 316 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1B1Q8NGR6 318 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1F12Q8NHA8 337 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C16orf78Q8WTQ4 265 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 HAVCR1Q96D42 359 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C19orf60Q96EN9 201 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms