RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	PAX8	Q06710	450 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	KCNJ8	Q15842	424 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	TEX36	Q5VZQ5	186 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	WDR25	Q64LD2	544 aa	Predicted RBP	11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	PLEKHG7	Q6ZR37	379 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	FAM90A1	Q86YD7	464 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	BOLL	Q8N9W6	283 aa	Known RBP	11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	FAM81A	Q8TBF8	368 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	OR5P3	Q8WZ94	311 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	ITFG2	Q969R8	447 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	EME1	Q96AY2	570 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	HRASLS5	Q96KN8	279 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	APOL4	Q9BPW4	351 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	MICU1	Q9BPX6	476 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	RTL8A	Q9BWD3	113 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	MOB1A	Q9H8S9	216 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	RNPEPL1	Q9HAU8	725 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	TRIM36	Q9NQ86	728 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	GPR84	Q9NQS5	396 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	CLN8	Q9UBY8	286 aa		11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	MRM2	Q9UI43	246 aa	Known RBP	11.08	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	TMEM210	A6NLX4	147 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	C22orf46	C9J442	243 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZNF670-ZNF695	F2Z2N8	137 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	LOC110117498-PIK3R3	F6TDL0	507 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	FCN3	O75636	299 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	APOL3	O95236	402 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	ATP6V1B1	P15313	513 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	CFHR2	P36980	270 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	MAP2K3	P46734	347 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	CDC42	P60953	191 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	POU4F2	Q12837	409 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	TMED1	Q13445	227 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	TUSC1	Q2TAM9	212 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	FAM76B	Q5HYJ3	339 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	KLF17	Q5JT82	389 aa	Predicted RBP	11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZDHHC23	Q8IYP9	409 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	CBR4	Q8N4T8	237 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	OR51E1	Q8TCB6	317 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	FAM216A	Q8WUB2	273 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	LRRC29	Q8WV35	223 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	PPP1R14A	Q96A00	147 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	MBOAT4	Q96T53	435 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	MRI1	Q9BV20	369 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	SMURF1	Q9HCE7	757 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	S100A14	Q9HCY8	104 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760	AUP1	Q9Y679	476 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760		R4GMQ9	66 aa		11.07	□□□□□ -0.64
SREBF1-223	ENST00000584760		A0A1W2PQL4	384 aa	Predicted RBP	11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	SRRM5	B3KS81	715 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	TRIM77	I1YAP6	450 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	CDIPT	O14735	213 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	ADAM20	O43506	726 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	DHRS3	O75911	302 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	GYPA	P02724	150 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	OR2T7	P0C7T2	308 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	PPIAL4G	P0DN37	164 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	NPY4R	P50391	375 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	ARMCX4	Q5H9R4	360 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZNF684	Q5T5D7	378 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	BCL2L15	Q5TBC7	163 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZBTB37	Q5TC79	503 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	USP43	Q70EL4	1123 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	COMMD2	Q86X83	199 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	C10orf67	Q8IYJ2	551 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	ELMOD2	Q8IZ81	293 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	PQLC1	Q8N2U9	271 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	OR2T27	Q8NH04	317 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	TRUB1	Q8WWH5	349 aa	Known RBP	11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	RAB40A	Q8WXH6	277 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	PIGC	Q92535	297 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	RFK	Q969G6	155 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	UBE2F	Q969M7	185 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	TBX5	Q99593	518 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	SLC6A7	Q99884	636 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	IMPAD1	Q9NX62	359 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	ORC6	Q9Y5N6	252 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	MGAM2	Q2M2H8	2515 aa		11.06	□□□□□ -0.64
SREBF1-223	ENST00000584760	IGHV3OR15-7	A0A075B7D8	119 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	NDUFA2	O43678	99 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	KRT8	P05787	483 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	MUC1	P15941	1255 aa	Predicted RBP	11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	FAH	P16930	419 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	HILS1	P60008	231 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	SNRPG	P62308	76 aa	Known RBP	11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	CEACAM21	Q3KPI0	293 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	ZIK1	Q3SY52	487 aa	Predicted RBP	11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	SLC25A30	Q5SVS4	291 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	BTNL3	Q6UXE8	466 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760		Q6ZSR3	168 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	SCCPDH	Q8NBX0	429 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	OR10H4	Q8NGA5	316 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	RPL3L	Q92901	407 aa	Known RBP	11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	UPRT	Q96BW1	309 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	RNF170	Q96K19	258 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	TECTB	Q96PL2	329 aa		11.05	□□□□□ -0.64
SREBF1-223	ENST00000584760	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms