RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 KLF17Q5JT82 389 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 Q6ZR03 302 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 KCTD8Q6ZWB6 473 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MOGAT3Q86VF5 341 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 KLBQ86Z14 1044 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ENTHD1Q8IYW4 607 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 OR8B12Q8NGG6 310 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 TAF15Q92804 592 aaKnown RBP eCLIP11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SGK3Q96BR1 496 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 FAM71F1Q96KD3 344 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 C1orf147Q96MC9 270 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MS4A7Q9GZW8 240 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 PBOV1Q9GZY1 135 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 FN3KRPQ9HA64 309 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 PLEKHA1Q9HB21 404 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ABCB9Q9NP78 766 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 GNG8Q9UK08 70 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 RPL36Q9Y3U8 105 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SNX5Q9Y5X3 404 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 R4GMQ9 66 aa11□□□□□ -0.65
CDK5RAP3-234ENST00000584525 METTL15A6NJ78 407 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 TRAPPC2LH3BP13 241 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SLC16A6O15403 523 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MLNRO43193 412 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 FADS2O95864 444 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ACTA2P62736 377 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ACTG2P63267 376 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 FAM3AP98173 230 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SLC34A1Q06495 639 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MED21Q13503 144 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 KLHL22Q53GT1 634 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SPRNQ5BIV9 151 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MUC20Q8N307 709 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 KLHL36Q8N4N3 616 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SPICQ8N5J4 248 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ERGIC1Q969X5 290 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZNF48Q96MX3 618 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 UFSP2Q9NUQ7 469 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 DCAF16Q9NXF7 216 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 OR52A1Q9UKL2 312 aa10.99□□□□□ -0.65
CDK5RAP3-234ENST00000584525 hCG_38984A0A1B0GV85 526 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 A0A1B0GVI7 797 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 A0A1W2PQL4 384 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 IRGMA1A4Y4 181 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SULT1C4O75897 302 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 IGHV2-70P01814 119 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 GRPP07492 148 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 DBTP11182 482 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ATP6V1B1P15313 513 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZNF12P17014 697 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 RBMXP38159 391 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 CD200P41217 278 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MMP16P51512 607 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZNF91Q05481 1191 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SLC9A3R2Q15599 337 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SLC25A30Q5SVS4 291 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZDHHC23Q8IYP9 409 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 C8orf59Q8N0T1 100 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ACBD7Q8N6N7 88 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 CELF2-AS1Q8N7Q2 184 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 BOLLQ8N9W6 283 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZNF420Q8TAQ5 688 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 PIGCQ92535 297 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 UBE2FQ969M7 185 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SIGLEC11Q96RL6 698 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 GCM1Q9NP62 436 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 GPR84Q9NQS5 396 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 FAM206AQ9NX38 181 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 CHCHD3Q9NX63 227 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 NUFIP1Q9UHK0 495 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 INSIG2Q9Y5U4 225 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MPC1Q9Y5U8 109 aa10.98□□□□□ -0.65
CDK5RAP3-234ENST00000584525 IGHV3OR16-10A0A075B7F0 116 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 A0A0U1RQV5 110 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZNF816-ZNF321PA0A0X1KG74 233 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 C5orf63A6NC05 138 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 CLDN34H7C241 214 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 MAGEB4O15481 346 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 CYB5R3P00387 301 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 HTR1AP08908 422 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SEC61A1P61619 476 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 BTG1P62324 171 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 RIPPLY1Q0D2K3 151 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 IL18R1Q13478 541 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ODF4Q2M2E3 257 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 TMEM155Q4W5P6 130 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 TP53I3Q53FA7 332 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 OGFRL1Q5TC84 451 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ZNF691Q5VV52 312 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 LRRC28Q86X40 367 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 RHOXF1Q8NHV9 184 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 OR51E1Q8TCB6 317 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 ITFG2Q969R8 447 aa10.97□□□□□ -0.65
CDK5RAP3-234ENST00000584525 SLITRK2Q9H156 845 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms