RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 C5orf49A4QMS7 147 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 CTAG2O75638 210 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 IGHV3-9P01782 118 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 F2RP25116 425 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 HAAOP46952 286 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
RNF43-208ENST00000584437 DEGS2Q6QHC5 323 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 C4orf45Q96LM5 186 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 RASL12Q9NYN1 266 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 GOLT1BQ9Y3E0 138 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 NRXN3Q9Y4C0 1643 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 TMEM272A0A1B0GTI8 110 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 LINC00862A6NCI5 91 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 PTBP3O95758 552 aaKnown RBP11.74□□□□□ -0.53
RNF43-208ENST00000584437 PMCHP20382 165 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 CD200P41217 278 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 WNT3P56703 355 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 ETFDHQ16134 617 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
RNF43-208ENST00000584437 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 LOC102723971A0A1B0GUV8 181 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 PTHLHP12272 177 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 ST6GAL1P15907 406 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 LPAL2Q16609 132 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 NOXO1Q8NFA2 376 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.73□□□□□ -0.53
RNF43-208ENST00000584437 TRIB1Q96RU8 372 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 OPN1MWP04001 364 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 ZBTB25P24278 435 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 TEX50A0A1B0GTY4 177 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 H3BP45 60 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 GPANK1O95872 356 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 INHBBP09529 407 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 TM4SF4P48230 202 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 RAB32Q13637 225 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 KIAA0040Q15053 153 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 WDR38Q5JTN6 314 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 YRDCQ86U90 279 aaKnown RBP11.73□□□□□ -0.53
RNF43-208ENST00000584437 RNF24Q9Y225 148 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 M0R143 59 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 ZFPL1O95159 310 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 PGFP49763 221 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 OR2A2Q6IF42 318 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 PRR27Q6MZM9 219 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 GALMQ96C23 342 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 ZNF391Q9UJN7 358 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 PMS2P1A4D2B8 440 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 TOX3O15405 576 aaPredicted RBP11.73□□□□□ -0.53
RNF43-208ENST00000584437 OR10X1Q8NGY0 326 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 EXTL1Q92935 676 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 MRPS24Q96EL2 167 aaKnown RBP11.73□□□□□ -0.53
RNF43-208ENST00000584437 LINC00052Q96N35 136 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 TAAR9Q96RI9 348 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
RNF43-208ENST00000584437 BARX1Q9HBU1 254 aaPredicted RBP11.73□□□□□ -0.53
RNF43-208ENST00000584437 ZNF835Q9Y2P0 537 aa11.73□□□□□ -0.53
RNF43-208ENST00000584437 GABRA1P14867 456 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 FAHP16930 419 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 TRAF4Q9BUZ4 470 aaPredicted RBP11.72□□□□□ -0.53
RNF43-208ENST00000584437 TMEM30AQ9NV96 361 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
RNF43-208ENST00000584437 HPP00738 406 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 HLA-DRB3P79483 266 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 C19orf57Q0VDD7 668 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 ZNF154Q13106 437 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 PRRC2BQ5JSZ5 2229 aaKnown RBP11.72□□□□□ -0.53
RNF43-208ENST00000584437 MAP1LC3B2A6NCE7 125 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 MVDP53602 400 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 SEC11CQ9BY50 192 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 MAP1LC3BQ9GZQ8 125 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 MMP25Q9NPA2 562 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 KIAA1456Q9P272 454 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 GPR37O15354 613 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 RPL29P47914 159 aaKnown RBP11.72□□□□□ -0.53
RNF43-208ENST00000584437 CD300CQ08708 224 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 C9orf62Q8N4C0 152 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 BET1LQ9NYM9 111 aa11.72□□□□□ -0.53
RNF43-208ENST00000584437 CAPZBP47756 277 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 CD81P60033 236 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 WDR73Q6P4I2 378 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 ABHD1Q96SE0 405 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 TWSG1Q9GZX9 223 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 M0QZK8 103 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
RNF43-208ENST00000584437 NKX2-2O95096 273 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 SLC37A1P57057 533 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 RAE1P78406 368 aaKnown RBP11.71□□□□□ -0.53
RNF43-208ENST00000584437 NHLRC1Q6VVB1 395 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 SLC16A13Q7RTY0 426 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms