RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CTSZQ9UBR2 303 aa9.22□□□□□ -0.93
CCDC47-206ENST00000584112 DNAJB9Q9UBS3 223 aa9.22□□□□□ -0.93
CCDC47-206ENST00000584112 ZNF391Q9UJN7 358 aa9.22□□□□□ -0.93
CCDC47-206ENST00000584112 DSCAML1Q8TD84 2053 aa9.22□□□□□ -0.93
CCDC47-206ENST00000584112 IGHV3OR16-10A0A075B7F0 116 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF879B4DU55 563 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 C22orf46C9J442 243 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 P2RY10O00398 339 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 SELENOFO60613 162 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 ECDO95905 644 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-206ENST00000584112 MUC1P15941 1255 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-206ENST00000584112 NAA10P41227 235 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-206ENST00000584112 RPS7P62081 194 aaKnown RBP9.21□□□□□ -0.94
CCDC47-206ENST00000584112 CBX1P83916 185 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 CDK5Q00535 292 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 IL5RAQ01344 420 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 MICBQ29980 383 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 KLHL12Q53G59 568 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 TEX36Q5VZQ5 186 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 PRSS45Q7RTY3 260 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 FAM90A1Q86YD7 464 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 CPOQ8IVL8 374 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 OR1M1Q8NGA1 313 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 THEM6Q8WUY1 208 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 LRRC29Q8WV35 223 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 AMELYQ99218 206 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 MICU1Q9BPX6 476 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 PCGF1Q9BSM1 259 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 RTL8AQ9BWD3 113 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 PAPOLGQ9BWT3 736 aaKnown RBP9.21□□□□□ -0.94
CCDC47-206ENST00000584112 BRD7Q9NPI1 651 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 KAAG1Q9UBP8 84 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 MPC1Q9Y5U8 109 aa9.21□□□□□ -0.94
CCDC47-206ENST00000584112 TCRBV3S1A0A5B6 114 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 TNFRSF13BO14836 293 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-206ENST00000584112 FKBP6O75344 327 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 TOX4O94842 621 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 GYPAP02724 150 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 CFHR2P36980 270 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 PSMA6P60900 246 aaKnown RBP9.2□□□□□ -0.94
CCDC47-206ENST00000584112 HOXA4Q00056 320 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-206ENST00000584112 PDCD1Q15116 288 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 SLC9A3R2Q15599 337 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 TAF9Q16594 264 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 METTL11BQ5VVY1 283 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 WDR82Q6UXN9 313 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 BRD3OSQ6XYD6 125 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 WDR86Q86TI4 376 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 GALNT4Q8N4A0 578 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 PAPD5Q8NDF8 572 aaKnown RBP9.2□□□□□ -0.94
CCDC47-206ENST00000584112 BCAS4Q8TDM0 211 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 ITFG2Q969R8 447 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 C12orf43Q96C57 262 aaKnown RBP9.2□□□□□ -0.94
CCDC47-206ENST00000584112 NRBF2Q96F24 287 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 PRDM13Q9H4Q3 707 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 SLC25A19Q9HC21 320 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 SMURF1Q9HCE7 757 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 NOX4Q9NPH5 578 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 LAMP5Q9UJQ1 280 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 RHBDD3Q9Y3P4 386 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 MMP24Q9Y5R2 645 aa9.2□□□□□ -0.94
CCDC47-206ENST00000584112 ACOD1A6NK06 481 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 TMEM210A6NLX4 147 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 SRRM5B3KS81 715 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 DVL1O14640 695 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 DNAJC8O75937 253 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-206ENST00000584112 MPIG6BO95866 241 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 PRKACGP22612 351 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 SNAPC1Q16533 368 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 CASC10Q5T4H9 136 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 LCN1P1Q5VSP4 162 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 C16orf87Q6PH81 154 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 KCTD18Q6PI47 426 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-206ENST00000584112 DEGS2Q6QHC5 323 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 BTN2A1Q7KYR7 527 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 SLC36A1Q7Z2H8 476 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 KRT77Q7Z794 578 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 C11orf53Q8IXP5 236 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 HS3ST5Q8IZT8 346 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 OR10Z1Q8NGY1 313 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 GATAD2BQ8WXI9 593 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 ST8SIA4Q92187 359 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 DMRTB1Q96MA1 342 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 WDFY2Q96P53 400 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 PRRG3Q9BZD7 231 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 YIPF3Q9GZM5 350 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 DNTTIP1Q9H147 329 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 TLNRD1Q9H1K6 362 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF319Q9P2F9 582 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 POMPQ9Y244 141 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 LRP12Q9Y561 859 aa9.19□□□□□ -0.94
CCDC47-206ENST00000584112 IGHV3OR15-7A0A075B7D8 119 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 HOXA3O43365 443 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-206ENST00000584112 CST4P01036 141 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 SFTPBP07988 381 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 MMP9P14780 707 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 ALOX5APP20292 161 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 SLC2A5P22732 501 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 MAP2K3P46734 347 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms