RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 CYB5AP00167 134 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 DHFRP00374 187 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 YES1P07947 543 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 AKAIN1P0CW23 69 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ANXA3P12429 323 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 CPN1P15169 458 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 HIST1H1DP16402 221 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ANXA7P20073 488 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 OR3A2P47893 321 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ZP1P60852 638 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 RPS27AP62979 156 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 MRPS15P82914 257 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 RIPPLY1Q0D2K3 151 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 MAB21L1Q13394 359 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 SNTB2Q13425 540 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 SLC10A1Q14973 349 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 GUSBP1Q15486 140 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 KISS1Q15726 138 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 UBE2V2Q15819 145 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 GSG1Q2KHT4 349 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ACSF3Q4G176 576 aaPredicted RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 SLC22A6Q4U2R8 563 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 HIKESHIQ53FT3 197 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 CD276Q5ZPR3 534 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 PLCXD3Q63HM9 321 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 STEAP1BQ6NZ63 245 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 TMEM53Q6P2H8 277 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 TFAP2EQ6VUC0 442 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 NAA40Q86UY6 237 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 GCNT2Q8N0V5 402 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 PAQR4Q8N4S7 273 aaPredicted RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ZBTB8BQ8NAP8 495 aaPredicted RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 TMEM104Q8NE00 496 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 OR11H7Q8NGC8 314 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 OR56B2PQ8NGI1 322 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 OR1K1Q8NGR3 316 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 NANOS1Q8WY41 292 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 SEH1LQ96EE3 360 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 CPNE2Q96FN4 548 aaPredicted RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 CYYR1Q96J86 154 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 FYTTD1Q96QD9 318 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 LPAR5Q9H1C0 372 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 MED28Q9H204 178 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 OR10A4Q9H209 315 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 OR51J1Q9H342 316 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 GHITMQ9H3K2 345 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ZMAT3Q9HA38 289 aaKnown RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 BEX1Q9HBH7 125 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 NEK6Q9HC98 313 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 UPB1Q9UBR1 384 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ZNF107Q9UII5 783 aaPredicted RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 POU2F3Q9UKI9 436 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ELF5Q9UKW6 265 aaPredicted RBP4.78□□□□□ -1.64
CRLF3-204ENST00000583527 ANAPC10Q9UM13 185 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 FLVCR2Q9UPI3 526 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 TIMM10BQ9Y5J6 103 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 KCNMB2Q9Y691 235 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 PKD1L2Q7Z442 2459 aa4.78□□□□□ -1.64
CRLF3-204ENST00000583527 TPRP12270 2363 aaKnown RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SHANK1Q9Y566 2161 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 IGKV1-27A0A075B6S5 117 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 LOC100509620A0A075B734 347 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 ZNF816-ZNF321PA0A0X1KG74 233 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 FOXI3A8MTJ6 420 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 ZNF736B4DX44 427 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SMLR1H3BR10 107 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 M0QYG6 137 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 EFSO43281 561 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SSNA1O43805 119 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SSX5O60225 188 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 RBBP9O75884 186 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 RAB3DO95716 219 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 PLATP00750 562 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 CD74P04233 296 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 CD3DP04234 171 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 AMY2AP04746 511 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 GSTP1P09211 210 aaKnown RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SULT1A3P0DMM9 295 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SULT1A4P0DMN0 295 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 COX5BP10606 129 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 MGMTP16455 207 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 GNB3P16520 340 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 PSMB1P20618 241 aaKnown RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 COX5AP20674 150 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 SERPINA2P20848 420 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 PRKACBP22694 351 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 CPT2P23786 658 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 MPGP29372 298 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 EIF2S3P41091 472 aaKnown RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 RAD52P43351 418 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 ALDH3B1P43353 468 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 GSK3AP49840 483 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 GNG2P59768 71 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 FAM3AP98173 230 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 ZNF92Q03936 586 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 FAPQ12884 760 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 TNK1Q13470 666 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 MEF2DQ14814 521 aa4.77□□□□□ -1.65
CRLF3-204ENST00000583527 ZNF169Q14929 603 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-204ENST00000583527 ZMYND11Q15326 602 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms