RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SLC29A1Q99808 456 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
TRAF4-213ENST00000578917 PLEKHA1Q9HB21 404 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 FAM206AQ9NX38 181 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 ENPP5Q9UJA9 477 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 COPS3Q9UNS2 423 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 LRCH1Q9Y2L9 728 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 PCDHGB1Q9Y5G3 927 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 SNX5Q9Y5X3 404 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 R4GMQ9 66 aa5.5□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF469Q96JG9 3925 aaPredicted RBP5.5□□□□□ -1.53
TRAF4-213ENST00000578917 FBN1P35555 2871 aaKnown RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 IGHV3OR15-7A0A075B7D8 119 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 A0A1B0GVI7 797 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 A0A1B0GWJ7 208 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 OOEPA6NGQ2 149 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 TMEM210A6NLX4 147 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF732B4DXR9 585 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ANKRD65E5RJM6 399 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 H3BSH0 61 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 J3QLW9 94 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 P2RY10O00398 339 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 TMPRSS2O15393 492 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 SYT7O43581 403 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 TCF21O43680 179 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 SULT1C4O75897 302 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 RGS9O75916 674 aaPredicted RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 NRASP01111 189 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 GYPAP02724 150 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 FAHP16930 419 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF19P17023 458 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ADRA2CP18825 462 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ACKR3P25106 362 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 CD80P33681 288 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 SEC61A1P61619 476 aaKnown RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 GNG3P63215 75 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 MFGE8Q08431 387 aaPredicted RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 RCN1Q15293 331 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 OCLNQ16625 522 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ZSCAN26Q16670 478 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 CEACAM21Q3KPI0 293 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF404Q494X3 552 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 TP53I3Q53FA7 332 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 KLHL22Q53GT1 634 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ARMCX4Q5H9R4 360 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 LYPD2Q6UXB3 125 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 KCTD20Q7Z5Y7 419 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ELMOD2Q8IZ81 293 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 BPIFB2Q8N4F0 458 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 RFLNBQ8N5W9 214 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ACBD7Q8N6N7 88 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 OR5T2Q8NGG2 359 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF671Q8TAW3 534 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF418Q8TF45 676 aaPredicted RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 RPL3LQ92901 407 aaKnown RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 ITFG2Q969R8 447 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 LYZL4Q96KX0 146 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 MBOAT4Q96T53 435 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 PPP1R3EQ9H7J1 279 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 MOB1AQ9H8S9 216 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 RNPEPL1Q9HAU8 725 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 AMBNQ9NP70 447 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 MMP26Q9NRE1 261 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 FAM118AQ9NWS6 357 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 SMPD3Q9NY59 655 aaPredicted RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 AASSQ9UDR5 926 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 NUFIP1Q9UHK0 495 aaKnown RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 MRM2Q9UI43 246 aaKnown RBP5.49□□□□□ -1.53
TRAF4-213ENST00000578917 SLC7A11Q9UPY5 501 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 SLC22A13Q9Y226 551 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 AUP1Q9Y679 476 aa5.49□□□□□ -1.53
TRAF4-213ENST00000578917 PPIAL4CA0A0B4J2A2 164 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 FAM230AA0A1W2PPH8 454 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 A6NIN4 97 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 OR5B21A6NL26 309 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 PRR32B1ATL7 298 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 TRAPPC2LH3BP13 241 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 AKR7A2O43488 359 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 DHRS3O75911 302 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 FSTL3O95633 263 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 TTRP02766 147 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 MUC1P15941 1255 aaPredicted RBP5.48□□□□□ -1.53
TRAF4-213ENST00000578917 THBS2P35442 1172 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 PSMB10P40306 273 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 NPY4RP50391 375 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 ACTA2P62736 377 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 ACTG2P63267 376 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 CSNK2BP67870 215 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF154Q13106 437 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 DMRTC1Q5HYR2 192 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 SLC25A30Q5SVS4 291 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 CLVS2Q5SYC1 327 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 LPCAT4Q643R3 524 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 HAGHLQ6PII5 290 aaPredicted RBP5.48□□□□□ -1.53
TRAF4-213ENST00000578917 WDR82Q6UXN9 313 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 DOK3Q7L591 496 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 SSX6Q7RTT6 188 aa5.48□□□□□ -1.53
TRAF4-213ENST00000578917 SLC36A1Q7Z2H8 476 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms