RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TMEM42Q69YG0 159 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 OR10K2Q6IF99 312 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 INO80CQ6PI98 192 aaPredicted RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 PLXDC2Q6UX71 529 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 MOB3CQ70IA8 216 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 TRAPPC6BQ86SZ2 158 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 GLCCI1Q86VQ1 547 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 FJX1Q86VR8 437 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 ZSCAN4Q8NAM6 433 aaPredicted RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 PXT1Q8NFP0 134 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 OR6K3Q8NGY3 331 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 PIGCQ92535 297 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 BCL2L2Q92843 193 aaPredicted RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 GAL3ST1Q99999 423 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 GINS4Q9BRT9 223 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 TM2D1Q9BX74 207 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 SELENOIQ9C0D9 397 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 ALX4Q9H161 411 aaPredicted RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 LPAR5Q9H1C0 372 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 OR10A4Q9H209 315 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 TP63Q9H3D4 680 aaPredicted RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 GHITMQ9H3K2 345 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 C12orf49Q9H741 205 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.68□□□□□ -0.86
SKA2-204ENST00000578519 TUBG2Q9NRH3 451 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 GPR173Q9NS66 373 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 ZNF224Q9NZL3 707 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 MYEF2Q9P2K5 600 aaKnown RBP9.68□□□□□ -0.86
SKA2-204ENST00000578519 CLCF1Q9UBD9 225 aa9.68□□□□□ -0.86
SKA2-204ENST00000578519 ALPK2Q86TB3 2170 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 DOCK10Q96BY6 2186 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 IGKV1-9A0A0C4DH69 117 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 FAM230AA0A1W2PPH8 454 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 ARPC1BO15143 372 aaKnown RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 AKR7A2O43488 359 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 HLA-HP01893 362 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 C1QBP02746 253 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 CD74P04233 296 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 CD3DP04234 171 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 HIST1H1DP16402 221 aaKnown RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 MGMTP16455 207 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 SELEP16581 610 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 C4BPBP20851 252 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 CCNOP22674 350 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 MPZP25189 248 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 PLA2G7Q13093 441 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 UNC119Q13432 240 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 C3AR1Q16581 482 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 KRTCAP3Q53RY4 240 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 SFRP5Q5T4F7 317 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 C9orf135Q5VTT2 229 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 PLCXD3Q63HM9 321 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 GLDNQ6ZMI3 551 aaPredicted RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 Q6ZS92 163 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 ASCL5Q7RTU5 278 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 LIX1LQ8IVB5 337 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 C1orf174Q8IYL3 243 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 FAM89BQ8N5H3 189 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 C1orf162Q8NEQ5 155 aaPredicted RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 ASB13Q8WXK3 278 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 GCDHQ92947 438 aaPredicted RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 ZNF486Q96H40 463 aaPredicted RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 HYLS1Q96M11 299 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 SOX7Q9BT81 388 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 REPIN1Q9BWE0 567 aaKnown RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 OBP2BQ9NPH6 170 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
SKA2-204ENST00000578519 PRSS50Q9UI38 385 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 ZNF222Q9UK12 451 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 TRIOO75962 3097 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 ZNF318Q5VUA4 2279 aa9.67□□□□□ -0.86
SKA2-204ENST00000578519 TMEM235A6NFC5 223 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 ANKRD30BLA7E2S9 258 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 WDR1O75083 606 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 CST4P01036 141 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 AMY2AP04746 511 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 RLN1P04808 185 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 TPOP07202 933 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 PTHLHP12272 177 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 BLVRBP30043 206 aaPredicted RBP9.66□□□□□ -0.86
SKA2-204ENST00000578519 ECI1P42126 302 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 PER3P56645 1201 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 TAS2R46P59540 309 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 PMP22Q01453 160 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 GUCA2AQ02747 115 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 ZNF92Q03936 586 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 SRSF6Q13247 344 aaKnown RBP9.66□□□□□ -0.86
SKA2-204ENST00000578519 GK2Q14410 553 aaPredicted RBP9.66□□□□□ -0.86
SKA2-204ENST00000578519 LINC00303Q3SY05 128 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 NSUN5P2Q63ZY6 315 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 ASCL4Q6XD76 172 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 Q6ZT83 130 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 SAXO1Q8IYX7 474 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 ZDHHC22Q8N966 263 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 OR8S1Q8NH09 359 aa9.66□□□□□ -0.86
SKA2-204ENST00000578519 OR2AE1Q8NHA4 323 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms