RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 TMPRSS13Q9BYE2 586 aa9.73□□□□□ -0.85
GGA3-204ENST00000578208 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
GGA3-204ENST00000578208 RNPEPL1Q9HAU8 725 aa9.73□□□□□ -0.85
GGA3-204ENST00000578208 ERVK-18Q9QC07 812 aa9.73□□□□□ -0.85
GGA3-204ENST00000578208 MRM2Q9UI43 246 aaKnown RBP9.73□□□□□ -0.85
GGA3-204ENST00000578208 ENPP5Q9UJA9 477 aa9.73□□□□□ -0.85
GGA3-204ENST00000578208 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
GGA3-204ENST00000578208 LOC105371242A0A075B767 164 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 RNF212BA8MTL3 300 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 MAGEB4O15481 346 aaPredicted RBP9.72□□□□□ -0.85
GGA3-204ENST00000578208 ADAM20O43506 726 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 TCF21O43680 179 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 ENTPD6O75354 484 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 SULT1C4O75897 302 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 DHRS3O75911 302 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 ZFP36P26651 326 aaKnown RBP9.72□□□□□ -0.85
GGA3-204ENST00000578208 NPY4RP50391 375 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 CSNK2BP67870 215 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 OCLNQ16625 522 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 MICBQ29980 383 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 ARMCX4Q5H9R4 360 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 SLC25A30Q5SVS4 291 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 PLCXD3Q63HM9 321 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 SSX6Q7RTT6 188 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 WDR86Q86TI4 376 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 ELMOD2Q8IZ81 293 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 GCSAMQ8N6F7 178 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 NANPQ8TBE9 248 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 OR5P3Q8WZ94 311 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 RDH12Q96NR8 316 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 MBOAT4Q96T53 435 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 ADI1Q9BV57 179 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 PLEKHA1Q9HB21 404 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 GNG8Q9UK08 70 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 PIGLQ9Y2B2 252 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 PCDHGB1Q9Y5G3 927 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 INSIG2Q9Y5U4 225 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 AUP1Q9Y679 476 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
GGA3-204ENST00000578208 LOC100130705A0A1B0GUX0 176 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 A0A1B0GVI7 797 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 DAPL1A0PJW8 107 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 CDIPTO14735 213 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 SRSF10O75494 262 aaKnown RBP9.71□□□□□ -0.86
GGA3-204ENST00000578208 TTRP02766 147 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 MUC1P15941 1255 aaPredicted RBP9.71□□□□□ -0.86
GGA3-204ENST00000578208 FAHP16930 419 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 ZNF12P17014 697 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 EPHA1P21709 976 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 GPM6AP51674 278 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 GNG3P63215 75 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 CEACAM21Q3KPI0 293 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 CEP78Q5JTW2 689 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 ZNF684Q5T5D7 378 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 CD276Q5ZPR3 534 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 LYPD2Q6UXB3 125 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 WDR82Q6UXN9 313 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 MOB3CQ70IA8 216 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 DOK3Q7L591 496 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 CCDC54Q8NEL0 328 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 OR10Z1Q8NGY1 313 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 ZNF418Q8TF45 676 aaPredicted RBP9.71□□□□□ -0.86
GGA3-204ENST00000578208 RPL3LQ92901 407 aaKnown RBP9.71□□□□□ -0.86
GGA3-204ENST00000578208 UBE2FQ969M7 185 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 PPP1R14AQ96A00 147 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 SLC29A1Q99808 456 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 TLNRD1Q9H1K6 362 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 PPP1R3EQ9H7J1 279 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 C8orf4Q9NR00 106 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 MMP26Q9NRE1 261 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 SMPD3Q9NY59 655 aaPredicted RBP9.71□□□□□ -0.86
GGA3-204ENST00000578208 DNAJB11Q9UBS4 358 aa9.71□□□□□ -0.86
GGA3-204ENST00000578208 IGHV3OR15-7A0A075B7D8 119 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 IGHV2-70DA0A0C4DH43 119 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 NKX6-3A6NJ46 265 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 OR5B21A6NL26 309 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 DHRS7CA6NNS2 312 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 TRAPPC2LH3BP13 241 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 P2RY10O00398 339 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 SYT7O43581 403 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 NRASP01111 189 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 LHBP01229 141 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 IGLV3-1P01715 115 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 GYPAP02724 150 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 EGR1P18146 543 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 ADRA2CP18825 462 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 ACTA2P62736 377 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 ACTG2P63267 376 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 RCN1Q15293 331 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 TP53I3Q53FA7 332 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 CLVS2Q5SYC1 327 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 TEX36Q5VZQ5 186 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 WDR25Q64LD2 544 aaPredicted RBP9.7□□□□□ -0.86
GGA3-204ENST00000578208 SLC36A1Q7Z2H8 476 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 KCTD20Q7Z5Y7 419 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 ENTHD1Q8IYW4 607 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 BPIFB2Q8N4F0 458 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 SCCPDHQ8NBX0 429 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 OR5A2Q8NGI9 324 aa9.7□□□□□ -0.86
GGA3-204ENST00000578208 HPSE2Q8WWQ2 592 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms