RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 OR5D13Q8NGL4 314 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 LRRC29Q8WV35 223 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 CFHR4Q92496 578 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 RAB3IPQ96QF0 476 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 RTL8AQ9BWD3 113 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 METTL8Q9H825 291 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 WDR76Q9H967 626 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 FGFR1OP2Q9NVK5 253 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 SF3B6Q9Y3B4 125 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 LRP12Q9Y561 859 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 ZNF816-ZNF321PA0A0X1KG74 233 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 A0A1W2PPH5 198 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 hCG_1807616A0A1W2PRN6 198 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 XPNPEP2O43895 674 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 HSD17B1P14061 328 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 ZNF3P17036 446 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 FMO3P31513 532 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 PSME3P61289 254 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 SRSF4Q08170 494 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 WDR38Q5JTN6 314 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 SFRP4Q6FHJ7 346 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 WDR82Q6UXN9 313 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 PROKR2Q8NFJ6 384 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 OR4C13Q8NGP0 309 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 OR9Q1Q8NGQ5 310 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 SLAMF6Q96DU3 332 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 OR10A2Q9H208 303 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 TNFRSF19Q9NS68 423 aa9.22□□□□□ -0.93
SMARCE1-214ENST00000578112 hCG_38984A0A1B0GV85 526 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 LOC105371267A0A1B0GV96 52 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 ANXA2P2A6NMY6 339 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 CST4P01036 141 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 GRPP07492 148 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 RASSF6Q6ZTQ3 369 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 SHFQ7M4L6 423 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 SDR9C7Q8NEX9 313 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 NMNAT2Q9BZQ4 307 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 YIPF3Q9GZM5 350 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 IL1RAPQ9NPH3 570 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 ONECUT1Q9UBC0 465 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 COMMD3-BMI1R4GMX3 469 aa9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 TET2Q6N021 2002 aaPredicted RBP9.21□□□□□ -0.93
SMARCE1-214ENST00000578112 ACOD1A6NK06 481 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 IFNGP01579 166 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 FABP3P05413 133 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 PRKACBP22694 351 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 GABRA5P31644 462 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 EFNB2P52799 333 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 FAM3AP98173 230 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF788Q6ZQV5 615 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 DCXRQ7Z4W1 244 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 NAA40Q86UY6 237 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 LNX2Q8N448 690 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 BOLLQ8N9W6 283 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 OR4S1Q8NGB4 309 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 TNFRSF14Q92956 283 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 NIPAL2Q9H841 368 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 RASL12Q9NYN1 266 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 HAO2Q9NYQ3 351 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 MAB21L2Q9Y586 359 aa9.21□□□□□ -0.94
SMARCE1-214ENST00000578112 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 FAHP16930 419 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 SPCS2Q15005 226 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 TIGD6Q17RP2 521 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 LRRC75BQ2VPJ9 315 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 FAM76BQ5HYJ3 339 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 OR5K1Q8NHB7 308 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 REEP6Q96HR9 211 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ANKRD61A6NGH8 418 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 SULT1B1O43704 296 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 FCN3O75636 299 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ACAA1P09110 424 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ATP6V1B1P15313 513 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ATP6V1E1P36543 226 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 NUDT2P50583 147 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 EMX1Q04741 257 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ZBTB37Q5TC79 503 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 SLC16A9Q7RTY1 509 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 CPLX4Q7Z7G2 160 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 SPATA24Q86W54 205 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 CALHM1Q8IU99 346 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 Q8N7P7 452 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ZNF454Q8N9F8 522 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 SLC37A3Q8NCC5 494 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 C19orf18Q8NEA5 215 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 RNF133Q8WVZ7 376 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 NDE1Q9NXR1 346 aa9.2□□□□□ -0.94
SMARCE1-214ENST00000578112 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 HSD11B1P28845 292 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 RBMXP38159 391 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 CX3CR1P49238 355 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 LCN1P1Q5VSP4 162 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 OTPQ5XKR4 325 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 OR2AE1Q8NHA4 323 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 TAF15Q92804 592 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 CCL13Q99616 98 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 NPFFR1Q9GZQ6 430 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 IGHV3-64DA0A0J9YX35 117 aa9.19□□□□□ -0.94
SMARCE1-214ENST00000578112 hCG_1809904A0A1W2PP81 198 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms