RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SLC38A2Q96QD8 506 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 SLC25A51Q9H1U9 297 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 GBA3Q9H227 469 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 SYT4Q9H2B2 425 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 OR51B5Q9H339 312 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 ANKRD19PQ9H560 264 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 KIR3DX1Q9H7L2 352 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 HRASLSQ9HDD0 168 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 ZC4H2Q9NQZ6 224 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 POLE4Q9NR33 117 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 BABAM2Q9NXR7 383 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 SAMD4AQ9UPU9 718 aaKnown RBP3.44□□□□□ -1.86
NUP88-213ENST00000576862 TIMM10BQ9Y5J6 103 aa3.44□□□□□ -1.86
NUP88-213ENST00000576862 PLXNB2O15031 1838 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 SIP14410 1827 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 hCG_1818297A0A087WSY0 165 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 A0A1W2PPV9 198 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 C2orf74A8MZ97 194 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 I3L4J1 428 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 PRMT5O14744 637 aaPredicted RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 BIRC5O15392 142 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 AQP9O43315 295 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 AIREO43918 545 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 FCN3O75636 299 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 VAMP5O95183 116 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 LDOC1O95751 146 aaPredicted RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 TMEM50AO95807 157 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 TIMP1P01033 207 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 IFNA5P01569 189 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 HLA-HP01893 362 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 PET100P0DJ07 73 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 PSMC3P17980 439 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 MDKP21741 143 aaPredicted RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 CXCR2P25025 360 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 GABRR2P28476 465 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 CD1CP29017 333 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 MIPP30301 263 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 SERPINB1P30740 379 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 COILP38432 576 aaPredicted RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 CDKN2BP42772 138 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 HLCSP50747 726 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 NKX2-5P52952 324 aaPredicted RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 MLF1P58340 268 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 DYNC1I2Q13409 638 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 PON3Q15166 354 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 MRPL23Q16540 153 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 POU2AF1Q16633 256 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 TMEM249Q2WGJ8 235 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 BSXQ3C1V8 233 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 CLLU1OSQ5K130 101 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 C9orf135Q5VTT2 229 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 DUPD1Q68J44 220 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 C22orf42Q6IC83 251 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 CCDC121Q6ZUS5 278 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 SSX7Q7RTT5 188 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 SLC16A14Q7RTX9 510 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 ANKRD37Q7Z713 158 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 C17orf82Q86X59 251 aaPredicted RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 IFT20Q8IY31 132 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 KIF2BQ8N4N8 673 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 ACBD4Q8NC06 268 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 OR2AP1Q8NGE2 309 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 OR1L6Q8NGR2 347 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 OR6N2Q8NGY6 317 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 OR2V1Q8NHB1 315 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 FAM110BQ8TC76 370 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 GPR151Q8TDV0 419 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 RXFP2Q8WXD0 754 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 IFT81Q8WYA0 676 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 RORBQ92753 470 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 MARC2Q969Z3 335 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 MAGOHBQ96A72 148 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 CMTM5Q96DZ9 223 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 RNF170Q96K19 258 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 ZFP3Q96NJ6 502 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 PRAP1Q96NZ9 151 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 XPO6Q96QU8 1125 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 PEBP4Q96S96 227 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 TEAD3Q99594 435 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 PKMYT1Q99640 499 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 EBNA1BP2Q99848 306 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 UTP23Q9BRU9 249 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 CAB39LQ9H9S4 337 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 UGT1A10Q9HAW8 530 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 ANKHQ9HCJ1 492 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 NANSQ9NR45 359 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 RGS18Q9NS28 235 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 C1orf123Q9NWV4 160 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 C1orf109Q9NX04 203 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 CCDC59Q9P031 241 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 OR1A1Q9P1Q5 309 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 PCYOX1Q9UHG3 505 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 CYB5R1Q9UHQ9 305 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 NXT1Q9UKK6 140 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 PRPF19Q9UMS4 504 aaKnown RBP3.43□□□□□ -1.86
NUP88-213ENST00000576862 MEMO1Q9Y316 297 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 SNX24Q9Y343 169 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.43□□□□□ -1.86
NUP88-213ENST00000576862 WIF1Q9Y5W5 379 aa3.43□□□□□ -1.86
NUP88-213ENST00000576862 DOCK5Q9H7D0 1870 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms