RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GUK1Q16774 197 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 ALKBH3Q96Q83 286 aaPredicted RBP15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 FAAP24Q9BTP7 215 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 TMEM74BQ9NUR3 256 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A1W2PP11 408 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ADRA2CP18825 462 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 IL2RGP31785 369 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 PPIAP62937 165 aaKnown RBP15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 MYBPHQ13203 477 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 SLC25A26Q70HW3 274 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 FOXQ1Q9C009 403 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 MED9Q9NWA0 146 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 NYNRINQ9P2P1 1898 aaKnown RBP15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ANKRD30BLA7E2S9 258 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 HMGB3O15347 200 aaKnown RBP15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 TPPPO94811 219 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 RNF4P78317 190 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 NCMAPQ5T1S8 102 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 THNSL2Q86YJ6 484 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 CPT1CQ8TCG5 803 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 PRRX2Q99811 253 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 MRPS18BQ9Y676 258 aaKnown RBP15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 hCG_1809904A0A1W2PP81 198 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A1W2PR64 198 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A1W2PRV1 198 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF98A6NK75 572 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 HMGN3Q15651 99 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 MOGAT2Q3SYC2 334 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ABHD17BQ5VST6 288 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 FBXL14Q8N1E6 418 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 PATZ1Q9HBE1 687 aaKnown RBP15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 OBP2AQ9NY56 170 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 FBXL17Q9UF56 701 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 SHANK1Q9Y566 2161 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 LOC102725191A0A1B0GVB3 256 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A1W2PPV4 95 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 PLSCR5A0PG75 271 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 CARD18P57730 90 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 TLE4Q04727 773 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 KISS1Q15726 138 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF141Q15928 474 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 WDR5BQ86VZ2 330 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 OR5AS1Q8N127 324 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ROBO4Q8WZ75 1007 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 MMP17Q9ULZ9 603 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 ST3GAL6Q9Y274 331 aa15.97■□□□□ 0.15
ATPAF1-214ENST00000576409 CXorf51AA0A1B0GTR3 108 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 GPR137BO60478 399 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 TBX6O95947 436 aaPredicted RBP15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 CRHP06850 196 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 SPP1P10451 314 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 B4GALT1P15291 398 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 PNLIPRP2P54317 469 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 ZP1P60852 638 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 UBE2NP61088 152 aaKnown RBP15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 THEM4Q5T1C6 240 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNRF4Q8WWF5 429 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 RPUSD4Q96CM3 377 aaKnown RBP15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 GJE1A6NN92 205 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 PHOX2AO14813 284 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 CYB5BO43169 146 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 DUS4LO95620 317 aaKnown RBP15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 IAPPP10997 89 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 SPANXN5Q5MJ07 72 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF561Q8N587 486 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 ELSPBP1Q96BH3 223 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF764Q96H86 408 aaPredicted RBP15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 DOCK7Q96N67 2140 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 BCO1Q9HAY6 547 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF275Q9NSD4 429 aaPredicted RBP15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 SERTAD4Q9NUC0 356 aa15.96■□□□□ 0.15
ATPAF1-214ENST00000576409 FRG2CA6NGY1 282 aa15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 SOX15O60248 233 aa15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 PNPP00491 289 aa15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 HIST1H1DP16402 221 aaKnown RBP15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 GRB2P62993 217 aaKnown RBP15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 RTL6Q6ICC9 239 aa15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 ATG4DQ86TL0 474 aaPredicted RBP15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 GNRHR2Q96P88 292 aa15.96■□□□□ 0.14
ATPAF1-214ENST00000576409 LMX1BO60663 402 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 GSTP1P09211 210 aaKnown RBP15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 ECH1Q13011 328 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 C12orf10Q9HB07 376 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 B4GALT7Q9UBV7 327 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 ZNF816-ZNF321PA0A0X1KG74 233 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 GPR37O15354 613 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 PTAFRP25105 342 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 C2orf68Q2NKX9 166 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 CLEC18BQ6UXF7 455 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 CDC20BQ86Y33 519 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 MAML2Q8IZL2 1156 aaPredicted RBP15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 PUSL1Q8N0Z8 303 aaKnown RBP15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 ARRDC1Q8N5I2 433 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 FAM181AQ8N9Y4 354 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 CCNL2Q96S94 520 aaPredicted RBP15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 VN1R1Q9GZP7 353 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 ESRP2Q9H6T0 727 aaKnown RBP15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 ATRAIDQ6UW56 229 aa15.95■□□□□ 0.14
ATPAF1-214ENST00000576409 DPPA2Q7Z7J5 298 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms