RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 Q6ZSR3 168 aa20.64■□□□□ 0.89
NPLOC4-217ENST00000574897 ZNF680Q8NEM1 530 aa20.64■□□□□ 0.89
NPLOC4-217ENST00000574897 PP6455Q8WZ26 134 aa20.64■□□□□ 0.89
NPLOC4-217ENST00000574897 DMXL1Q9Y485 3027 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 SCGNO76038 276 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 APOC1P02654 83 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 GSK3AP49840 483 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 SCRN3Q0VDG4 424 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 AIMP2Q13155 320 aaKnown RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 MEF2DQ14814 521 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 GRK1Q15835 563 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 OR51T1Q8NGJ9 327 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 OR2H1Q9GZK4 316 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 ALX4Q9H161 411 aaPredicted RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 ELL3Q9HB65 397 aaPredicted RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 ABI3Q9P2A4 366 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 NOSIPQ9Y314 301 aaKnown RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 PLSCR5A0PG75 271 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 OR2AT4A6NND4 320 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 MTRF1O75570 445 aaKnown RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 NAT2P11245 290 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 MGMTP16455 207 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 FOXG1P55316 489 aaPredicted RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 OR52H1Q8NGJ2 320 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 ELMOD3Q96FG2 381 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 NUDT16L1Q9BRJ7 211 aaKnown RBP20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 SLC7A10Q9NS82 523 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 B4GALT7Q9UBV7 327 aa20.63■□□□□ 0.89
NPLOC4-217ENST00000574897 SLC22A5O76082 557 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 CFDP00746 253 aaPredicted RBP20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 RPS27AP62979 156 aaKnown RBP20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 PLGLB1Q02325 96 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 TRIP6Q15654 476 aaKnown RBP20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 RIPPLY2Q5TAB7 128 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 C11orf88Q6PI97 169 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 TUSC5Q8IXB3 177 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 SEMA6DQ8NFY4 1073 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 FNDC9Q8TBE3 224 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 PCNPQ8WW12 178 aaKnown RBP20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 FN3KRPQ9HA64 309 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 ZFHX4Q86UP3 3567 aa20.62■□□□□ 0.89
NPLOC4-217ENST00000574897 MFNGO00587 321 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 ALX3O95076 343 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 PLATP00750 562 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 DHRS2Q13268 280 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 CCDC107Q8WV48 283 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 HAS2Q92819 552 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 PRRT1Q99946 306 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 CALHM2Q9HA72 323 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 SLC2A8Q9NY64 477 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 FRYQ5TBA9 3013 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 F5H5P2 479 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 MRPL33O75394 65 aaKnown RBP20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 MICBQ29980 383 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 PDSS1Q5T2R2 415 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 C12orf45Q8N5I9 185 aaPredicted RBP20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 OR56B1Q8NGI3 324 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 OR4K15Q8NH41 348 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 CST11Q9H112 138 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 TIMM10BQ9Y5J6 103 aa20.61■□□□□ 0.89
NPLOC4-217ENST00000574897 H3BUI4 141 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 GSTP1P09211 210 aaKnown RBP20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 UBBP0CG47 229 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 HOXD11P31277 338 aaPredicted RBP20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 LY6G6FQ5SQ64 297 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 MAFIPQ8WZ33 124 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 URM1Q9BTM9 101 aaKnown RBP20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 ZNF230Q9UIE0 474 aaPredicted RBP20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 ANGPTL7O43827 346 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 ZNF708P17019 499 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 MEOX1P50221 254 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 PLEKHA6Q9Y2H5 1048 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 LIPGQ9Y5X9 500 aa20.6■□□□□ 0.89
NPLOC4-217ENST00000574897 IGKV1-27A0A075B6S5 117 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 A0A096LPE4 126 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 A0A1W2PPZ6 126 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 HLA-AP01891 365 aaKnown RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 MMP7P09237 267 aaPredicted RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 DHODHQ02127 395 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 KRTAP27-1Q3LI81 207 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 LIN54Q6MZP7 749 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 FAM89BQ8N5H3 189 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 ADAD2Q8NCV1 583 aaKnown RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 NAXEQ8NCW5 288 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 CPEB3Q8NE35 698 aaKnown RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 FBXW5Q969U6 566 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 ZNF318Q5VUA4 2279 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 FAM230AA0A1W2PPH8 454 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 FOXI3A8MTJ6 420 aaPredicted RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 SPRY1O43609 319 aaPredicted RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 SP1P08047 785 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 BLVRBP30043 206 aaPredicted RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 ARFRP1Q13795 201 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 EXOSC2Q13868 293 aaKnown RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 PABPC1L2AQ5JQF8 200 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 TMEM45BQ96B21 275 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 CITED4Q96RK1 184 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 ZNF581Q9P0T4 197 aa20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 CNOT1A5YKK6 2376 aaKnown RBP20.59■□□□□ 0.89
NPLOC4-217ENST00000574897 IGKV3D-15A0A087WSY6 115 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms