RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PRO3102Q9H379 93 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 PRDM13Q9H4Q3 707 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 LMAN1LQ9HAT1 526 aa8.52□□□□□ -1.04
CCDC40-212ENST00000574799 PPIHO43447 177 aaKnown RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 RAMP1O60894 148 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 SCGNO76038 276 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 IL2RAP01589 272 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 BTF3P20290 206 aaKnown RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 DLK1P80370 383 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 RPL18Q07020 188 aaKnown RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 FBXO42Q6P3S6 717 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 MFSD9Q8NBP5 474 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 OR4D6Q8NGJ1 314 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 OR2G3Q8NGZ4 309 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 RNF128Q8TEB7 428 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 OR8B4Q96RC9 309 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 LPAR4Q99677 370 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 DDA1Q9BW61 102 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 RHBDD3Q9Y3P4 386 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 COLEC10Q9Y6Z7 277 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 CFAP47Q6ZTR5 3102 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 FAM230AA0A1W2PPH8 454 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 C2CD4DB7Z1M9 353 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 SOX1O00570 391 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HSPA12AO43301 675 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 NUDT21O43809 227 aaKnown RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BKO60814 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 GPR75O95800 540 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BJP06899 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 SOD3P08294 240 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HLA-GP17693 338 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BOP23527 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BBP33778 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 PPP1CCP36873 323 aaKnown RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BDP58876 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 FXYD4P59646 89 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BCP62807 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST2H2BEQ16778 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HEPN1Q6WQI6 88 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 LRP11Q86VZ4 500 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 SLC25A43Q8WUT9 341 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BHQ93079 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 MOGAT1Q96PD6 335 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 GAL3ST4Q96RP7 486 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BNQ99877 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 HIST1H2BMQ99879 126 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 RARRES2Q99969 163 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 OR14J1Q9UGF5 321 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 DAPP1Q9UN19 280 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 RCL1Q9Y2P8 373 aaKnown RBP8.52□□□□□ -1.05
CCDC40-212ENST00000574799 MTCH2Q9Y6C9 303 aa8.52□□□□□ -1.05
CCDC40-212ENST00000574799 CDRT15L2A8MXV6 281 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 H0YL77 283 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 CLDN4O14493 209 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 EDN3P14138 238 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 GABRG2P18507 467 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 RPS15AP62244 130 aaKnown RBP8.51□□□□□ -1.05
CCDC40-212ENST00000574799 RAB11AP62491 216 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 RPL23AP62750 156 aaKnown RBP8.51□□□□□ -1.05
CCDC40-212ENST00000574799 RUNX2Q13950 521 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 ANKRD55Q3KP44 614 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 CDC20BQ86Y33 519 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 OR5D18Q8NGL1 313 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 OTOSQ8NHW6 89 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 DTD1Q8TEA8 209 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 ASB5Q8WWX0 329 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 PMM1Q92871 262 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 MCHR2Q969V1 340 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 TM4SF19Q96DZ7 209 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 STACQ99469 402 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 SOX7Q9BT81 388 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 URM1Q9BTM9 101 aaKnown RBP8.51□□□□□ -1.05
CCDC40-212ENST00000574799 DNAJB12Q9NXW2 375 aaKnown RBP8.51□□□□□ -1.05
CCDC40-212ENST00000574799 B3GALT5Q9Y2C3 310 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 GOLT1BQ9Y3E0 138 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 A0A087WUJ7 227 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 CTSVO60911 334 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 APBB3O95704 486 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 SMIM10L1P0DMW3 83 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 HKR1P10072 659 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 SLC26A5P58743 744 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 LSM6P62312 80 aaKnown RBP8.51□□□□□ -1.05
CCDC40-212ENST00000574799 SLC10A1Q14973 349 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 FBXW12Q6X9E4 464 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 TMEM123Q8N131 208 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 APCDD1LQ8NCL9 501 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 PATE1Q8WXA2 126 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 SMIM10Q96HG1 83 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 WDR92Q96MX6 357 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 CABLES2Q9BTV7 478 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 SLC26A1Q9H2B4 701 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 CNTD2Q9H8S5 307 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 VSX1Q9NZR4 365 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-212ENST00000574799 LRIT1Q9P2V4 623 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 PILRAQ9UKJ1 303 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 OR52A1Q9UKL2 312 aa8.51□□□□□ -1.05
CCDC40-212ENST00000574799 TNRC6BQ9UPQ9 1833 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms