RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SDR9C7Q8NEX9 313 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 PROKR2Q8NFJ6 384 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 RPS4Y2Q8TD47 263 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 HSH2DQ96JZ2 352 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 RAB3IPQ96QF0 476 aaPredicted RBP9.67□□□□□ -0.86
CTNS-208ENST00000574218 KCNJ15Q99712 375 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 IFT27Q9BW83 186 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 PAPOLGQ9BWT3 736 aaKnown RBP9.67□□□□□ -0.86
CTNS-208ENST00000574218 CDCA4Q9BXL8 241 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 FN3KQ9H479 309 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 CENPMQ9NSP4 180 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 ENPP4Q9Y6X5 453 aa9.67□□□□□ -0.86
CTNS-208ENST00000574218 A0A0G2JND7 137 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 MEGF11A6BM72 1044 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 TMEM210A6NLX4 147 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 F2RL2O00254 374 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 HIST1H1CP16403 213 aaKnown RBP9.66□□□□□ -0.86
CTNS-208ENST00000574218 AMY2BP19961 511 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 COX7A1P24310 79 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 HSD11B1P28845 292 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 OMPP47874 163 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 SPIBQ01892 262 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 KRT72Q14CN4 511 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 AGBL2Q5U5Z8 902 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 METTL21CQ5VZV1 264 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 HCP5Q6MZN7 132 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 CBLL1Q75N03 491 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 SLC16A9Q7RTY1 509 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 DCXRQ7Z4W1 244 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 MKXQ8IYA7 352 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 FOXRED1Q96CU9 486 aaPredicted RBP9.66□□□□□ -0.86
CTNS-208ENST00000574218 REEP6Q96HR9 211 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 SIKE1Q9BRV8 207 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 ELL3Q9HB65 397 aaPredicted RBP9.66□□□□□ -0.86
CTNS-208ENST00000574218 ABCB9Q9NP78 766 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 NLKQ9UBE8 527 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 RAB21Q9UL25 225 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
CTNS-208ENST00000574218 A0A1W2PRQ8 180 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 TCRBV4S1A1TA0A5B7 111 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 TVP23AA6NH52 213 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 OR2AT4A6NND4 320 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 ZNF878C9JN71 531 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 CXCR6O00574 342 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 ARPC3O15145 178 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 AKR7A2O43488 359 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 SERPINA1P01009 418 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 APOC1P02654 83 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 ACAA1P09110 424 aaPredicted RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 SPARCP09486 303 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 GLRA1P23415 457 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 OTX1P32242 354 aaPredicted RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 RPS27P42677 84 aaKnown RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 SLC15A1P46059 708 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 FXYD6P3P58550 94 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 ERVFRD-1P60508 538 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 GRB2P62993 217 aaKnown RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 FAM3AP98173 230 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 DGCR6Q14129 220 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 GFOD2Q3B7J2 385 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 ARPINQ7Z6K5 226 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 OR5AU1Q8NGC0 362 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 OR2T4Q8NH00 348 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 ANGPTL6Q8NI99 470 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 RPL3LQ92901 407 aaKnown RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 FAM162AQ96A26 154 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 SLAMF6Q96DU3 332 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 WNT10AQ9GZT5 417 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 TLNRD1Q9H1K6 362 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 WDR13Q9H1Z4 485 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 OR52D1Q9H346 318 aa9.65□□□□□ -0.86
CTNS-208ENST00000574218 MRPL22Q9NWU5 206 aaKnown RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 ZMAT5Q9UDW3 170 aaKnown RBP9.65□□□□□ -0.86
CTNS-208ENST00000574218 OR6C68A6NDL8 312 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 IDH3BO43837 385 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 TFF1P04155 84 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
CTNS-208ENST00000574218 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
CTNS-208ENST00000574218 PYCR1P32322 319 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 CX3CR1P49238 355 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.64□□□□□ -0.87
CTNS-208ENST00000574218 CCDC121Q6ZUS5 278 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 PIGWQ7Z7B1 504 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 CENPVQ7Z7K6 275 aaPredicted RBP9.64□□□□□ -0.87
CTNS-208ENST00000574218 OR5K1Q8NHB7 308 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 CAPSLQ8WWF8 208 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 SPSB4Q96A44 273 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 HIST1H2AAQ96QV6 131 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 OR10A2Q9H208 303 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 USE1Q9NZ43 259 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.64□□□□□ -0.87
CTNS-208ENST00000574218 TSSC4Q9Y5U2 329 aaPredicted RBP9.64□□□□□ -0.87
CTNS-208ENST00000574218 MPC1Q9Y5U8 109 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 U3KQK5 164 aa9.64□□□□□ -0.87
CTNS-208ENST00000574218 A6NDX4 124 aa9.63□□□□□ -0.87
CTNS-208ENST00000574218 VGLL3A8MV65 326 aa9.63□□□□□ -0.87
CTNS-208ENST00000574218 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms