RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 CDC40O60508 579 aaKnown RBP eCLIP4.13□□□□□ -1.75
CDC27-215ENST00000573550 KHDRBS3O75525 346 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 UPK3AO75631 287 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 SCGNO76038 276 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 GLSO94925 669 aaPredicted RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 EML2O95834 649 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MT-ATP6P00846 226 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 CSTAP01040 98 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 IGHMP01871 453 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MT-ND4P03905 459 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MRPL3P09001 348 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 CT62P0C5K7 136 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 ASAH2BP0C7U1 165 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 VPREB1P12018 145 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 RPA2P15927 270 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 FUT1P19526 365 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 TBPP20226 339 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MPZP25189 248 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 AK4P27144 223 aaPredicted RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 RPL4P36578 427 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 ACVR1BP36896 505 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 VEGFCP49767 419 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 P2RX1P51575 399 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 SNRPD2P62316 118 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 GPM6BQ13491 265 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 ZNF345Q14585 488 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 LGALSLQ3ZCW2 172 aaPredicted RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 KLHL26Q53HC5 615 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 NHLRC3Q5JS37 347 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 CORO6Q6QEF8 472 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 STAC2Q6ZMT1 411 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 KRT77Q7Z794 578 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 LRRTM1Q86UE6 522 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 SLC51BQ86UW2 128 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 TIGD4Q8IY51 512 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 SPERTQ8NA61 448 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 CYB561A3Q8NBI2 242 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 SDR9C7Q8NEX9 313 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR11H4Q8NGC9 324 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR4D9Q8NGE8 314 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR52R1Q8NGF1 315 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR2AJ1Q8NGZ0 328 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR6S1Q8NH40 331 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR4K13Q8NH42 304 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR51A7Q8NH64 312 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR5AK2Q8NH90 309 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MOSPD2Q8NHP6 518 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 LRRC20Q8TCA0 184 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 GRHL3Q8TE85 626 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 THEM6Q8WUY1 208 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 CCDC107Q8WV48 283 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 RGP1Q92546 391 aaPredicted RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 RIT1Q92963 219 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MCHR2Q969V1 340 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 ZMYND19Q96E35 227 aaPredicted RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 MSANTD3Q96H12 275 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 ART5Q96L15 291 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 ZFP3Q96NJ6 502 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 RBP7Q96R05 134 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 CCDC3Q9BQI4 270 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 NUDT16L1Q9BRJ7 211 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 ALG12Q9BV10 488 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 DNTTIP1Q9H147 329 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 ARRDC1-AS1Q9H2J1 176 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 C1orf198Q9H425 327 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 C8orf33Q9H7E9 229 aaPredicted RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 AUNIPQ9H7T9 357 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 WDR76Q9H967 626 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 UBQLN4Q9NRR5 601 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MTFP1Q9UDX5 166 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OR5V1Q9UGF6 321 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 OPN4Q9UHM6 478 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MRTO4Q9UKD2 239 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 ERVK-19Q9WJR5 959 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 MRPS2Q9Y399 296 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 PTRH2Q9Y3E5 179 aaKnown RBP4.13□□□□□ -1.75
CDC27-215ENST00000573550 MMACHCQ9Y4U1 282 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 DOCK9Q9BZ29 2069 aa4.13□□□□□ -1.75
CDC27-215ENST00000573550 SCN3AQ9NY46 2000 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 MYO7AQ13402 2215 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 LOC102723996A0A087X1L8 192 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 hCG_1807616A0A1W2PRN6 198 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 MFSD2BA6NFX1 497 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 GGT3PA6NGU5 568 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 FRG2CA6NGY1 282 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 ACOD1A6NK06 481 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 ANXA2P2A6NMY6 339 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 PRAMEF26H0Y7S4 382 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 H0YIG0 161 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 SLC17A2O00624 439 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 NUDT21O43809 227 aaKnown RBP4.12□□□□□ -1.75
CDC27-215ENST00000573550 EIF4E2O60573 245 aaKnown RBP4.12□□□□□ -1.75
CDC27-215ENST00000573550 MPC2O95563 127 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 WDPCPO95876 746 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 RENP00797 406 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 NGFP01138 241 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 IGKV1D-16P01601 117 aa4.12□□□□□ -1.75
CDC27-215ENST00000573550 IGLV1-44P01699 117 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms