RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 OR9K2Q8NGE7 335 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 OR6T1Q8NGN1 323 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 GEMIN6Q8WXD5 167 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 RASL10AQ92737 203 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 MCUR1Q96AQ8 359 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SPSB1Q96BD6 273 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 S100PBPQ96BU1 408 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 PIK3IP1Q96FE7 263 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SLC41A3Q96GZ6 507 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 C2orf48Q96LS8 159 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 KLHDC3Q9BQ90 382 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 LINC00470Q9BZP3 86 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 NDEL1Q9GZM8 345 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 B3GAT2Q9NPZ5 323 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 NANSQ9NR45 359 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 CHCHD3Q9NX63 227 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 CMTM6Q9NX76 183 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 MRPL39Q9NYK5 338 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 TAS2R16Q9NYV7 291 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 STX18Q9P2W9 335 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 RIMS3Q9UJD0 308 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 ZNF229Q9UJW7 825 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SAMD4AQ9UPU9 718 aaKnown RBP3.22□□□□□ -1.89
NUP88-202ENST00000570937 MGAT4BQ9UQ53 548 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 MED31Q9Y3C7 131 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 FLVCR1Q9Y5Y0 555 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 SELENOKQ9Y6D0 94 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 DCHS2Q6V1P9 2916 aa3.22□□□□□ -1.89
NUP88-202ENST00000570937 A0A1W2PRG6 482 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 OR5H1A6NKK0 313 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 NME4O00746 187 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 UBE2CO00762 179 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 PLPP3O14495 311 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 RNF13O43567 381 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 MGRN1O60291 552 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 TPST2O60704 377 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 SHOX2O60902 331 aaPredicted RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 LYZL6O75951 148 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 SERPINA1P01009 418 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 IGF2P01344 180 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 IGHV3-13P01766 116 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 IGHV3-9P01782 118 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 MT-ND1P03886 318 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 FREM3P0C091 2139 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 ADORA3P0DMS8 318 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 HSD17B1P14061 328 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 FUT1P19526 365 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 COX5AP20674 150 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 CALB2P22676 271 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 CPT2P23786 658 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 PTAFRP25105 342 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 IFNGR2P38484 337 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 GUCA1AP43080 201 aaPredicted RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 RAD52P43351 418 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 OR1E2P47887 323 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 GSK3BP49841 420 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 DAP3P51398 398 aaKnown RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 CLDN17P56750 224 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 UBE2NP61088 152 aaKnown RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 DLK1P80370 383 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 PUDPQ08623 228 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 TRAM2Q15035 370 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 STK11Q15831 433 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 GLYATQ6IB77 296 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 NIPAL3Q6P499 406 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 C16orf54Q6UWD8 224 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 GDPGP1Q6ZNW5 385 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 NANOGNBQ7Z5D8 188 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 DPPA2Q7Z7J5 298 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 ZER1Q7Z7L7 766 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 RBM45Q8IUH3 476 aaKnown RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 ZNF433Q8N7K0 673 aaPredicted RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 ZIC4Q8N9L1 334 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 GPR32P1Q8NGA4 272 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 OR6N1Q8NGY5 312 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 OR5J2Q8NH18 312 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 FNDC8Q8TC99 324 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 TMEM239Q8WW34 195 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 BPIFA2Q96DR5 249 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 DNAJA3Q96EY1 480 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 SLC25A44Q96H78 314 aaPredicted RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 PRRC1Q96M27 445 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 KCNS3Q9BQ31 491 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 SOSTQ9BQB4 213 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 PARLQ9H300 379 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 ANKRD19PQ9H560 264 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 EGLN3Q9H6Z9 239 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 GORASP2Q9H8Y8 452 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 ABCD2Q9UBJ2 740 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 FBXL3Q9UKT7 428 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 TMCC3Q9ULS5 477 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 PRPF19Q9UMS4 504 aaKnown RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 POFUT2Q9Y2G5 429 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 RNF115Q9Y4L5 304 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 PTPN13Q12923 2485 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 SPTAN1Q13813 2472 aaKnown RBP3.21□□□□□ -1.9
NUP88-202ENST00000570937 ARHGAP21Q5T5U3 1957 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 CENPEQ02224 2701 aa3.21□□□□□ -1.9
NUP88-202ENST00000570937 TACC2O95359 2948 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 PCNX1Q96RV3 2341 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms