RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CCL3L1P16619 93 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 OTX1P32242 354 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 CEBPDP49716 269 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 FAM3AP98173 230 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 SPIBQ01892 262 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 TNFAIP8L3Q5GJ75 292 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 TMEM200BQ69YZ2 307 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 DNM1P34Q6PK57 102 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 DRAM2Q6UX65 266 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZNF782Q6ZMW2 699 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 MBOAT2Q6ZWT7 520 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 RNF113BQ8IZP6 322 aaKnown RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 OFCC1Q8IZS5 231 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 DPP10Q8N608 796 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 TMEM185AQ8NFB2 350 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 SPSB4Q96A44 273 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZBTB9Q96C00 473 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 FOXRED1Q96CU9 486 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 GPX7Q96SL4 187 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 P2RX4Q99571 388 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 EBF4Q9BQW3 602 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 NLKQ9UBE8 527 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZNF222Q9UK12 451 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 SIGLEC7Q9Y286 467 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 TBL2Q9Y4P3 447 aaKnown RBP8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 N6AMT1Q9Y5N5 214 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 SNX13Q9Y5W8 968 aa8.31□□□□□ -1.08
CTDNEP1-202ENST00000570380 FAM90A22PA8MWA6 464 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 ODF3BA8MYP8 253 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 FFAR1O14842 300 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 TXNDC12O95881 172 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 LPLP06858 475 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 PSG2P11465 335 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 IFNA8P32881 189 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 IDH3AP50213 366 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 PRKXP51817 358 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 LUMP51884 338 aaPredicted RBP8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 FXYD6P3P58550 94 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 VSNL1P62760 191 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 TRAM2Q15035 370 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 SLC36A3Q495N2 470 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 CYBRD1Q53TN4 286 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 KCTD18Q6PI47 426 aaPredicted RBP8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZNF730Q6ZMV8 503 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 SLC16A9Q7RTY1 509 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 CYB561A3Q8NBI2 242 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 TPD52L3Q96J77 140 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 FNDC11Q9BVV2 318 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 NDEL1Q9GZM8 345 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 MYLK2Q9H1R3 596 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 OPA3Q9H6K4 179 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 MRPL22Q9NWU5 206 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 LRP12Q9Y561 859 aa8.3□□□□□ -1.08
CTDNEP1-202ENST00000570380 A0A1W2PPH5 198 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 SH2D7A6NKC9 451 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 XRCC2O43543 280 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 TROVE2P10155 538 aaKnown RBP eCLIP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 AZGP1P25311 298 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 GNALP38405 381 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 MYCNOSP40205 109 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 ECI1P42126 302 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 RPS27P42677 84 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 RPL23AP62750 156 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 RPL31P62899 125 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZNF273Q14593 569 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 ABCA11PQ4W5N1 156 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 KLHL12Q53G59 568 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 AGBL2Q5U5Z8 902 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZNF626Q68DY1 528 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 DPY19L2P2Q6ZN68 376 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 PIGWQ7Z7B1 504 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZBTB46Q86UZ6 589 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 OR4M1Q8NGD0 313 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 LZICQ8WZA0 190 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 SGK3Q96BR1 496 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 SDSLQ96GA7 329 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 FAM46AQ96IP4 442 aaKnown RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 CITED4Q96RK1 184 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 NMNAT3Q96T66 252 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 MICU1Q9BPX6 476 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 CCDC28BQ9BUN5 200 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 FGF23Q9GZV9 251 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 SP140LQ9H930 580 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 USE1Q9NZ43 259 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 RHBDD3Q9Y3P4 386 aa8.29□□□□□ -1.08
CTDNEP1-202ENST00000570380 hCG_1809904A0A1W2PP81 198 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 A0A1W2PPE2 198 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 A0A1W2PR64 198 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 A0A1W2PRV1 198 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 TMEM120BA0PK00 339 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 HLA-DQA2P01906 255 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 AMY1AP04745 511 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 AMY2AP04746 511 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 PSKH1P11801 424 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 GLRA1P23415 457 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 NOS3P29474 1203 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 DCTDP32321 178 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms