RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 MALLQ13021 153 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 ZNF273Q14593 569 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 RSPO1Q2MKA7 263 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 KRTAP27-1Q3LI81 207 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 RPS26P11Q5JNZ5 115 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 C6orf136Q5SQH8 315 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 KANK2Q63ZY3 851 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 LCN8Q6JVE9 175 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 SMARCD3Q6STE5 483 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 TMPRSS11FQ6ZWK6 438 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 TRMT10CQ7L0Y3 403 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 NANOGNBQ7Z5D8 188 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 DPP10Q8N608 796 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 C5orf56Q8N8D9 126 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 TMEM185AQ8NFB2 350 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 ARPC1AQ92747 370 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 UBE2E2Q96LR5 201 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 COQ7Q99807 217 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 PARD6BQ9BYG5 372 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 TLNRD1Q9H1K6 362 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 OR51J1Q9H342 316 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 NINJ2Q9NZG7 142 aa5.04□□□□□ -1.6
HERPUD1-217ENST00000569429 SMIM23A6NLE4 172 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 OR2AT4A6NND4 320 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 TPST2O60704 377 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 TSPAN19P0C672 248 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 UMPSP11172 480 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 CTLA4P16410 223 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 PSMB8P28062 276 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 GDNFP39905 211 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 SLC9A3P48764 834 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 CLNS1AP54105 237 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 NCALDP61601 193 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 LSM6P62312 80 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 GNB1P62873 340 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 KIAA0141Q14154 515 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 MRPL21Q7Z2W9 205 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 GTSCR1Q86UQ5 136 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 TRIML2Q8N7C3 387 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 FNDC5Q8NAU1 212 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 SYT8Q8NBV8 401 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 TWIST2Q8WVJ9 160 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 ZBTB9Q96C00 473 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 SDSLQ96GA7 329 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 TMEM19Q96HH6 336 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 OVOL2Q9BRP0 275 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 HDHD2Q9H0R4 259 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 RABEP2Q9H5N1 569 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 GNB4Q9HAV0 340 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 BCL2L10Q9HD36 194 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 ARGLU1Q9NWB6 273 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 ING3Q9NXR8 418 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 DPM3Q9P2X0 92 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 NLKQ9UBE8 527 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 BTNL2Q9UIR0 455 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 ZNF222Q9UK12 451 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 STUB1Q9UNE7 303 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 FIS1Q9Y3D6 152 aa5.03□□□□□ -1.6
HERPUD1-217ENST00000569429 IGKV1D-17A0A075B6S4 117 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 IGHV2-26A0A0B4J1V2 119 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A18PA6NE21 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A16PA6NEW6 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 CCDC154A6NI56 674 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A20PA6NIJ5 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 LINC01548A6NM66 108 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A9PA6NNJ1 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A12PA8MX19 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A5PA8MXJ8 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 H0Y980 276 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 J3QL48 77 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 CDIPTO14735 213 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 RER1O15258 196 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 RIPK2O43353 540 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 CHP2O43745 196 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 KRT75O95678 551 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FGF4P08620 206 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 ACSM4P0C7M7 580 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A15PP0C7V4 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A13PP0C7W8 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A14PP0C7W9 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 FAM90A24PP0C7X0 464 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 MDH1P40925 334 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 AQP2P41181 271 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 SLURP1P55000 103 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 DNAJB13P59910 316 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 ACTA2P62736 377 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 VSNL1P62760 191 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 ACTG2P63267 376 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 ACTC1P68032 377 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 ACTA1P68133 377 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 HIST1H3AP68431 136 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 PITPNAQ00169 270 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 CFHR3Q02985 330 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 HIST2H3PS2Q5TEC6 136 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 TTC33Q6PID6 262 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 SLC2A7Q6PXP3 512 aa5.02□□□□□ -1.61
HERPUD1-217ENST00000569429 HIST2H3AQ71DI3 136 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms