RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CLDN4O14493 209 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 AQP7O14520 342 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TNFSF14O43557 240 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 OR2C1O95371 312 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 IGKV1D-16P01601 117 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 GIMD1P0DJR0 217 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HPGDP15428 266 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 AKR1C4P17516 323 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BCP62807 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 C17orf67Q0P5P2 114 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 UNC119Q13432 240 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 RAB32Q13637 225 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ERV3-1Q14264 604 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 CLINT1Q14677 625 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ELOBQ15370 118 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SURF2Q15527 256 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ZNF74Q16587 644 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST2H2BEQ16778 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 PCK2Q16822 640 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ELOA3BQ3SY89 546 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SLC22A6Q4U2R8 563 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 KHDC3LQ587J8 217 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SPNS3Q6ZMD2 512 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 GVQW1Q8N7I0 195 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ZNF610Q8N9Z0 462 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ELOA3Q8NG57 546 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 CASTOR1Q8WTX7 329 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BHQ93079 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TSACCQ96A04 125 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 C3orf49Q96BT1 292 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 C8orf44Q96CB5 159 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 C5orf34Q96MH7 638 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BNQ99877 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIST1H2BMQ99879 126 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SRMSQ9H3Y6 488 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 LYRM4Q9HD34 91 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TAS2R4Q9NYW5 299 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 DAPP1Q9UN19 280 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SCN2AQ99250 2005 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 FITM1A5D6W6 292 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 B9A039 149 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 AGPAT2O15120 278 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SCGNO76038 276 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 PTBP3O95758 552 aaKnown RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 PDGFBP01127 241 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 CXCR1P25024 350 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 FPR2P25090 351 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 RELBQ01201 579 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 FAM53BQ14153 422 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 EIF2B1Q14232 305 aaKnown RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SHBQ15464 509 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 MIDNQ504T8 468 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIKESHIQ53FT3 197 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ACTBL2Q562R1 376 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ABLIM2Q6H8Q1 611 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ZNF529Q6P280 563 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 C5orf24Q7Z6I8 188 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ZNF679Q8IYX0 411 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 OR4D6Q8NGJ1 314 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 M1APQ8TC57 530 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 MARCH1Q8TCQ1 289 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TSEN15Q8WW01 171 aaKnown RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 MVB12AQ96EY5 273 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 LURAP1Q96LR2 239 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 NOL4LQ96MY1 436 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TGM7Q96PF1 710 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TSPAN32Q96QS1 320 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 INTS14Q96SY0 518 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SSX3Q99909 188 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 TPSD1Q9BZJ3 242 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 UNKLQ9H9P5 680 aaKnown RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 FAM212BQ9NTI7 297 aaPredicted RBP4.82□□□□□ -1.64
LINC01541-202ENST00000568095 PRODH2Q9UF12 536 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 SH3BGRL2Q9UJC5 107 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 DHDHQ9UQ10 334 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 FER1L5A0AVI2 2057 aa4.82□□□□□ -1.64
LINC01541-202ENST00000568095 ZNF860A6NHJ4 632 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 FIGNL2A6NMB9 653 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 TSTD3H0UI37 97 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 TCAPO15273 167 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 DEDDO75618 318 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 TSPAN15O95858 294 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 CXCL1P09341 107 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 SLC35G4P0C7Q5 338 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 GABRA3P34903 492 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 NDUFA6P56556 154 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 NXPH1P58417 271 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 PSG6Q00889 435 aa4.81□□□□□ -1.64
LINC01541-202ENST00000568095 MFGE8Q08431 387 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms