RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 ISG20L2Q9H9L3 353 aaKnown RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 TMEM165Q9HC07 324 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 FGF20Q9NP95 211 aaPredicted RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 TMEM160Q9NX00 188 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 ERVK13-1Q9NX77 482 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 GTF2A1LQ9UNN4 478 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 RPL36Q9Y3U8 105 aaKnown RBP8.22□□□□□ -1.09
CLK3-220ENST00000567992 PCDHGB1Q9Y5G3 927 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 MPC1Q9Y5U8 109 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 V9GYS6 101 aa8.22□□□□□ -1.09
CLK3-220ENST00000567992 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 LRRC30A6NM36 301 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 DHRS7CA6NNS2 312 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 CEACAM18A8MTB9 384 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 LMX1BO60663 402 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 CRLF1O75462 422 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 FADS2O95864 444 aaKnown RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 TGFAP01135 160 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 LHBP01229 141 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 GRPP07492 148 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 MSMBP08118 114 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 GNALP38405 381 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 MDH2P40926 338 aaKnown RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 MAP2K3P46734 347 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 DVL1P1P54792 670 aaPredicted RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 SEC61A1P61619 476 aaKnown RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 ACTA2P62736 377 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ACTG2P63267 376 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 RIPPLY1Q0D2K3 151 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 GALEQ14376 348 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ZNF404Q494X3 552 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 FAM76BQ5HYJ3 339 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 FAM166AQ6J272 317 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 WDR82Q6UXN9 313 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 FAM220AQ7Z4H9 259 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 PEG10Q86TG7 708 aaKnown RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 LHFPL3Q86UP9 236 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 COMMD2Q86X83 199 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ZDHHC23Q8IYP9 409 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 SYS1Q8N2H4 156 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 FTMTQ8N4E7 242 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 SPICQ8N5J4 248 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 GCSAMQ8N6F7 178 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 SETD9Q8NE22 299 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 C19orf18Q8NEA5 215 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 OR2G2Q8NGZ5 317 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 OR8S1Q8NH09 359 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 PIGCQ92535 297 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 RAB39BQ96DA2 213 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 C4orf36Q96KX1 117 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 METTL17Q9H7H0 456 aaPredicted RBP8.21□□□□□ -1.1
CLK3-220ENST00000567992 FN3KRPQ9HA64 309 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ABCB9Q9NP78 766 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 INPP5EQ9NRR6 644 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 C14orf119Q9NWQ9 140 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 C1orf123Q9NWV4 160 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 UBAP1Q9NZ09 502 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 FRRS1LQ9P0K9 344 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ENPP5Q9UJA9 477 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 PIGLQ9Y2B2 252 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 HSPE1-MOB4S4R3N1 261 aa8.21□□□□□ -1.1
CLK3-220ENST00000567992 ARHGAP32A7KAX9 2087 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 PPIAL4EA0A075B759 164 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 LOC107986453A0A1B0GWG9 222 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 TMEM210A6NLX4 147 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 ANXA2P2A6NMY6 339 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 OR4C45A6NMZ5 311 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 KIAA1324LA8MWY0 1029 aaPredicted RBP8.2□□□□□ -1.1
CLK3-220ENST00000567992 B4DSR2 109 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 E9PI62 339 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 PPIAL4DF5H284 164 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 H0YJX3 145 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 TNFRSF13BO14836 293 aaPredicted RBP8.2□□□□□ -1.1
CLK3-220ENST00000567992 PPIAL4FP0DN26 164 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
CLK3-220ENST00000567992 CD80P33681 288 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 MZT1Q08AG7 82 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 BLMHQ13867 455 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 ODF4Q2M2E3 257 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 KLHL22Q53GT1 634 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 DMRTC1Q5HYR2 192 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 CEP78Q5JTW2 689 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 DOK3Q7L591 496 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 KCTD20Q7Z5Y7 419 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 RDH10Q8IZV5 341 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 C8orf59Q8N0T1 100 aaPredicted RBP8.2□□□□□ -1.1
CLK3-220ENST00000567992 C1orf87Q8N0U7 546 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 MUC20Q8N307 709 aaPredicted RBP8.2□□□□□ -1.1
CLK3-220ENST00000567992 OR11L1Q8NGX0 322 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 OR51F2Q8NH61 342 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 MICU1Q9BPX6 476 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 TMEM246Q9BRR3 403 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 RTL8AQ9BWD3 113 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 PATZ1Q9HBE1 687 aaKnown RBP8.2□□□□□ -1.1
CLK3-220ENST00000567992 LPAR2Q9HBW0 351 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 KCNS2Q9ULS6 477 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 DIMT1Q9UNQ2 313 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms