RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ABHD6Q9BV23 337 aa15.4■□□□□ 0.06
LINC01238-205ENST00000567549 CHIAQ9BZP6 476 aa15.4■□□□□ 0.06
LINC01238-205ENST00000567549 TNFRSF19Q9NS68 423 aa15.4■□□□□ 0.06
LINC01238-205ENST00000567549 ARMC1Q9NVT9 282 aa15.4■□□□□ 0.06
LINC01238-205ENST00000567549 AP4S1Q9Y587 144 aa15.4■□□□□ 0.06
LINC01238-205ENST00000567549 U3KQV3 271 aa15.4■□□□□ 0.06
LINC01238-205ENST00000567549 hCG_38984A0A1B0GV85 526 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 PRR23D1E9PI22 279 aaPredicted RBP15.39■□□□□ 0.05
LINC01238-205ENST00000567549 GNGT2O14610 69 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 HMGN1P05114 100 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 LYNP07948 512 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 PRR23D2P0DMB1 279 aaPredicted RBP15.39■□□□□ 0.05
LINC01238-205ENST00000567549 RAP2AP10114 183 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 ATP6V1B2P21281 511 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 OMGP23515 440 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 GSK3AP49840 483 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 BLMHQ13867 455 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 GFOD2Q3B7J2 385 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 RUSC1-AS1Q66K80 236 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 METAP1DQ6UB28 335 aaPredicted RBP15.39■□□□□ 0.05
LINC01238-205ENST00000567549 LYPD4Q6UWN0 246 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 ZNF826PQ6ZT77 177 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 GIPC3Q8TF64 312 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 WFDC12Q8WWY7 111 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 SMURF1Q9HCE7 757 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 ONECUT1Q9UBC0 465 aa15.39■□□□□ 0.05
LINC01238-205ENST00000567549 PRODHO43272 600 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 CST1P01037 141 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 ZNF121P58317 390 aaPredicted RBP15.38■□□□□ 0.05
LINC01238-205ENST00000567549 DBPQ10586 325 aaPredicted RBP15.38■□□□□ 0.05
LINC01238-205ENST00000567549 WDR82Q6UXN9 313 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 TIGD4Q8IY51 512 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 OR4Q3Q8NH05 313 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 ZNRF4Q8WWF5 429 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 SGK3Q96BR1 496 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 TLNRD1Q9H1K6 362 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 VCX3BQ9H321 246 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 YY1AP1Q9H869 796 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 C1RLQ9NZP8 487 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 DNAJC27Q9NZQ0 273 aa15.38■□□□□ 0.05
LINC01238-205ENST00000567549 TCRBV5S2A0A599 114 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 H3BNX3 289 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 PAHP00439 452 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 OPRL1P41146 370 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 ATPAF1Q5TC12 328 aaPredicted RBP15.37■□□□□ 0.05
LINC01238-205ENST00000567549 LINC01590Q5TEZ4 76 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 NCR3LG1Q68D85 454 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 VMO1Q7Z5L0 202 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 PQLC1Q8N2U9 271 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 DTX3Q8N9I9 347 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 HAO2Q9NYQ3 351 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 RNF114Q9Y508 228 aa15.37■□□□□ 0.05
LINC01238-205ENST00000567549 SOX21Q9Y651 276 aaPredicted RBP15.37■□□□□ 0.05
LINC01238-205ENST00000567549 IGHV3OR15-7A0A075B7D8 119 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 GPR137BO60478 399 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 CLUP10909 449 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 FCGR1AP12314 374 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 VHLP40337 213 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 IER3P46695 156 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 WDR38Q5JTN6 314 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 SLC35D3Q5M8T2 416 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 KCTD18Q6PI47 426 aaPredicted RBP15.36■□□□□ 0.05
LINC01238-205ENST00000567549 C1orf122Q6ZSJ8 110 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 KCTD8Q6ZWB6 473 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 OTOSQ8NHW6 89 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 FAM81AQ8TBF8 368 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 THEM6Q8WUY1 208 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 FEVQ99581 238 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 CCL13Q99616 98 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 OR51V1Q9H2C8 321 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 MMP27Q9H306 513 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 BRD7Q9NPI1 651 aa15.36■□□□□ 0.05
LINC01238-205ENST00000567549 ACOD1A6NK06 481 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 CDIPTO14735 213 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 CST4P01036 141 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 DHRS7BQ6IAN0 325 aaPredicted RBP15.35■□□□□ 0.05
LINC01238-205ENST00000567549 ZDHHC23Q8IYP9 409 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 LY6G5BQ8NDX9 201 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 OR5R1Q8NH85 324 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 CANT1Q8WVQ1 401 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 H1FXQ92522 213 aaKnown RBP15.35■□□□□ 0.05
LINC01238-205ENST00000567549 UBE2FQ969M7 185 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 ITPKCQ96DU7 683 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 CITED1Q99966 193 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 RHBDD3Q9Y3P4 386 aa15.35■□□□□ 0.05
LINC01238-205ENST00000567549 A0A1W2PPH5 198 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 FAM183AA6NL82 134 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 E2F6O75461 281 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 PSKH1P11801 424 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 ATP6V1B1P15313 513 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 POU1F1P28069 291 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 MAP2K3P46734 347 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 PSMA6P60900 246 aaKnown RBP15.34■□□□□ 0.05
LINC01238-205ENST00000567549 RPS7P62081 194 aaKnown RBP15.34■□□□□ 0.05
LINC01238-205ENST00000567549 CSNK2BP67870 215 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 PPP1R8Q12972 351 aaKnown RBP15.34■□□□□ 0.05
LINC01238-205ENST00000567549 PRDX4Q13162 271 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 KLHL12Q53G59 568 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 PRSS45Q7RTY3 260 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 KRT77Q7Z794 578 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms