RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TAF9Q16594 264 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 KHDC1LQ5JSQ8 128 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 GFI1BQ5VTD9 330 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 HAPLN4Q86UW8 402 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 THNSL2Q86YJ6 484 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 CHST4Q8NCG5 386 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SLC38A5Q8WUX1 472 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 NEURL3Q96EH8 262 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 PTPN18Q99952 460 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 GOLGA2P5Q9HBQ8 144 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 LHX3Q9UBR4 397 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 IL36AQ9UHA7 158 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 KCNG2Q9UJ96 466 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 GPR52Q9Y2T5 361 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 ZFC3H1O60293 1989 aaKnown RBP2.62□□□□□ -1.99
CHD9-218ENST00000566029 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.62□□□□□ -1.99
CHD9-218ENST00000566029 K7EQM0 130 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 TNFSF15O95150 251 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 TDGF1P13385 188 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 HNRNPA2B1P22626 353 aaKnown RBP2.62□□□□□ -1.99
CHD9-218ENST00000566029 TEAD1P28347 426 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 FXYD6P3P58550 94 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SHHQ15465 462 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 KRTCAP3Q53RY4 240 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 AWAT2Q6E213 333 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 C11orf87Q6NUJ2 197 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 VRK2Q86Y07 508 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 OR5AR1Q8NGP9 310 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 OR13C9Q8NGT0 318 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 RNASE8Q8TDE3 154 aaKnown RBP2.62□□□□□ -1.99
CHD9-218ENST00000566029 ASB11Q8WXH4 323 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 ABHD6Q9BV23 337 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 RRAGCQ9HB90 399 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SPAG17Q6Q759 2223 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 UPK3BL1B0FP48 263 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 UPK3BL2E5RIL1 263 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 H3BTX0 84 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 CST4P01036 141 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 ADH4P08319 380 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 H2BFMP0C1H6 154 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 OR13C7P0DN81 318 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 GRPRP30550 384 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 PRSS3P35030 304 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 APLNRP35414 380 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SUB1P53999 127 aaKnown RBP eCLIP2.62□□□□□ -1.99
CHD9-218ENST00000566029 RAP1BP61224 184 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 LEMD1Q68G75 181 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 DHRS13Q6UX07 377 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 HEPN1Q6WQI6 88 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 CPEB2Q7Z5Q1 589 aaKnown RBP2.62□□□□□ -1.99
CHD9-218ENST00000566029 SCAMP5Q8TAC9 235 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SYT3Q9BQG1 590 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 C20orf144Q9BQM9 153 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 KATNBL1Q9H079 304 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SLC26A1Q9H2B4 701 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SLC22A13Q9Y226 551 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 COL11A2P13942 1736 aaPredicted RBP2.62□□□□□ -1.99
CHD9-218ENST00000566029 TGIF2-C20orf24A0A0A6YYL0 155 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 IFITM5A6NNB3 132 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 CNMDO75829 334 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 GBAP04062 536 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 CA6P23280 308 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 ZNF84P51523 738 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 LILRA4P59901 499 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 TM4SF20Q53R12 229 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 PRAMEF5Q5TYX0 476 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 PRAMEF6Q5VXH4 476 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 SPRYD7Q5W111 196 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 METRNLQ641Q3 311 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 TMPPEQ6ZT21 453 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 APCDD1LQ8NCL9 501 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 CNTNAP3Q9BZ76 1288 aa2.62□□□□□ -1.99
CHD9-218ENST00000566029 IQCF5A8MTL0 148 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 PRR32B1ATL7 298 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 HMGN4O00479 90 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 ERI3O43414 337 aaKnown RBP2.61□□□□□ -1.99
CHD9-218ENST00000566029 FRS3O43559 492 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 TSPAN2O60636 221 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 EMP1P54849 157 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 FUT5Q11128 374 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 DHRS2Q13268 280 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 ZNF506Q5JVG8 444 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 Q6ZRG5 221 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 LYG2Q86SG7 212 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 ZNF573Q86YE8 665 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 LMNTD1Q8N9Z9 388 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 PLPP7Q8NBV4 271 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 PDCD1LG2Q9BQ51 273 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 MAGEH1Q9H213 219 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 MBNL1Q9NR56 388 aaKnown RBP2.61□□□□□ -1.99
CHD9-218ENST00000566029 FAM212BQ9NTI7 297 aaPredicted RBP2.61□□□□□ -1.99
CHD9-218ENST00000566029 ZDHHC3Q9NYG2 299 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 PLEK2Q9NYT0 353 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 B3GAT1Q9P2W7 334 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 CLEC4EQ9ULY5 219 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 V9GYS6 101 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 TRAV18A0A075B6X5 111 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 SOX1O00570 391 aaPredicted RBP2.61□□□□□ -1.99
CHD9-218ENST00000566029 LRP3O75074 770 aa2.61□□□□□ -1.99
CHD9-218ENST00000566029 DUSP11O75319 330 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms