RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ZNF281Q9Y2X9 895 aa22.04■■□□□ 1.12
NME3-208ENST00000565379 A0A087WXM4 84 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.03■■□□□ 1.12
NME3-208ENST00000565379 SPRY3O43610 288 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 SSX4O60224 188 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 IGHV1-46P01743 117 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 MAP2K4P45985 399 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 PRSS12P56730 875 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 RDH10Q8IZV5 341 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 GPR148Q8TDV2 347 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 PDCD1LG2Q9BQ51 273 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 REG4Q9BYZ8 158 aa22.03■■□□□ 1.12
NME3-208ENST00000565379 SIRT4Q9Y6E7 314 aaPredicted RBP22.03■■□□□ 1.12
NME3-208ENST00000565379 ARFGEF3Q5TH69 2177 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 CELP19835 753 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 EFNA4P52798 201 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 CDH15P55291 814 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 SLC3A1Q07837 685 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 OR8G1Q15617 311 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 YIF1BQ5BJH7 314 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 TSPAN14Q8NG11 270 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 OR2Z1Q8NG97 314 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 THRSPQ92748 146 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 GHSRQ92847 366 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 UFD1Q92890 307 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 ELMOD3Q96FG2 381 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 MGLLQ99685 303 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 MDFIQ99750 246 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 PAPOLGQ9BWT3 736 aaKnown RBP22.02■■□□□ 1.12
NME3-208ENST00000565379 DECR2Q9NUI1 292 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 IL19Q9UHD0 177 aa22.02■■□□□ 1.12
NME3-208ENST00000565379 ANXA2P2A6NMY6 339 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 LILRA1O75019 489 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 F12P00748 615 aaPredicted RBP22.01■■□□□ 1.11
NME3-208ENST00000565379 CA6P23280 308 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 TPBGQ13641 420 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 UBE2UQ5VVX9 321 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 MS4A15Q8N5U1 240 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 CELF2-AS1Q8N7Q2 184 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 PP6455Q8WZ26 134 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 PGLYRP3Q96LB9 341 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 TECTBQ96PL2 329 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 SORCS2Q96PQ0 1159 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 ADAT1Q9BUB4 502 aaKnown RBP22.01■■□□□ 1.11
NME3-208ENST00000565379 TPK1Q9H3S4 243 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 VCX3AQ9NNX9 186 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 MYOZ1Q9NP98 299 aaPredicted RBP22.01■■□□□ 1.11
NME3-208ENST00000565379 ZNF275Q9NSD4 429 aaPredicted RBP22.01■■□□□ 1.11
NME3-208ENST00000565379 RHBDD3Q9Y3P4 386 aa22.01■■□□□ 1.11
NME3-208ENST00000565379 IGHV4-30-2A0A087WSY4 118 aa22■■□□□ 1.11
NME3-208ENST00000565379 LY6HO94772 140 aa22■■□□□ 1.11
NME3-208ENST00000565379 SERPINA3P01011 423 aa22■■□□□ 1.11
NME3-208ENST00000565379 HSMCR30P0CW71 290 aa22■■□□□ 1.11
NME3-208ENST00000565379 TNFRSF1AP19438 455 aa22■■□□□ 1.11
NME3-208ENST00000565379 PCMT1P22061 227 aa22■■□□□ 1.11
NME3-208ENST00000565379 SRP9P49458 86 aaKnown RBP22■■□□□ 1.11
NME3-208ENST00000565379 MRPS11P82912 194 aaKnown RBP22■■□□□ 1.11
NME3-208ENST00000565379 TNFAIP6P98066 277 aaPredicted RBP22■■□□□ 1.11
NME3-208ENST00000565379 CLVS2Q5SYC1 327 aa22■■□□□ 1.11
NME3-208ENST00000565379 TMEM42Q69YG0 159 aa22■■□□□ 1.11
NME3-208ENST00000565379 OR13C3Q8NGS6 347 aa22■■□□□ 1.11
NME3-208ENST00000565379 GTF3AQ92664 365 aaKnown RBP22■■□□□ 1.11
NME3-208ENST00000565379 HIST1H2AAQ96QV6 131 aa22■■□□□ 1.11
NME3-208ENST00000565379 C14orf119Q9NWQ9 140 aa22■■□□□ 1.11
NME3-208ENST00000565379 DHDHQ9UQ10 334 aa22■■□□□ 1.11
NME3-208ENST00000565379 MLNRO43193 412 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 GATBO75879 557 aaKnown RBP21.99■■□□□ 1.11
NME3-208ENST00000565379 CD2P06729 351 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 CPEP16870 476 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 FAHP16930 419 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 TRAM1Q15629 374 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 ZDHHC23Q8IYP9 409 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 ZCCHC24Q8N2G6 241 aaKnown RBP21.99■■□□□ 1.11
NME3-208ENST00000565379 ZFP41Q8N8Y5 198 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 OR8S1Q8NH09 359 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 PIGCQ92535 297 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 MICU1Q9BPX6 476 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 SAP30LQ9HAJ7 183 aa21.99■■□□□ 1.11
NME3-208ENST00000565379 TPD52L2O43399 206 aaKnown RBP21.98■■□□□ 1.11
NME3-208ENST00000565379 NRASP01111 189 aa21.98■■□□□ 1.11
NME3-208ENST00000565379 ZNF20P17024 532 aa21.98■■□□□ 1.11
NME3-208ENST00000565379 PSMA1P25786 263 aaKnown RBP21.98■■□□□ 1.11
NME3-208ENST00000565379 CD200P41217 278 aa21.98■■□□□ 1.11
NME3-208ENST00000565379 PRDX4Q13162 271 aa21.98■■□□□ 1.11
NME3-208ENST00000565379 TSTQ16762 297 aaKnown RBP21.98■■□□□ 1.11
NME3-208ENST00000565379 TSEN15Q8WW01 171 aaKnown RBP21.98■■□□□ 1.11
NME3-208ENST00000565379 ZNF850A8MQ14 1090 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 HLA-DPB1P04440 258 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 MAGEB1P43366 347 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 CCL8P80075 99 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 ZNF525Q8N782 197 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 OR10AD1Q8NGE0 317 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 OR51A4Q8NGJ6 313 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 ERGIC1Q969X5 290 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 OPALINQ96PE5 141 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 RTL8AQ9BWD3 113 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 CHST5Q9GZS9 411 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 NEK6Q9HC98 313 aa21.97■■□□□ 1.11
NME3-208ENST00000565379 A0A096LNT2 108 aa21.96■■□□□ 1.11
NME3-208ENST00000565379 PNMA8CA0A1B0GUJ8 204 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms