RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 COLCA2A8K830 154 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 SYNGR4O95473 234 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 HLA-DPB1P04440 258 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 FGF9P31371 208 aaPredicted RBP15.56■□□□□ 0.08
GDE1-203ENST00000564172 ZNF133P52736 654 aaPredicted RBP15.56■□□□□ 0.08
GDE1-203ENST00000564172 CDK5R1Q15078 307 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 LRRN1Q6UXK5 716 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 FNDC9Q8TBE3 224 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 RNF128Q8TEB7 428 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 ACOT12Q8WYK0 555 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 RNF166Q96A37 237 aaPredicted RBP15.56■□□□□ 0.08
GDE1-203ENST00000564172 PNPLA2Q96AD5 504 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 PGLYRP3Q96LB9 341 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 GFOD1Q9NXC2 390 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 RASL12Q9NYN1 266 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 MKRN2OSH3BPM6 223 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 SIGLEC5O15389 551 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 UPK3AO75631 287 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 WISP2O76076 250 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 OR2A4O95047 310 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 ZNF44P15621 663 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 CDAP32320 146 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 NUTF2P61970 127 aaKnown RBP15.56■□□□□ 0.08
GDE1-203ENST00000564172 EIF2B1Q14232 305 aaKnown RBP15.56■□□□□ 0.08
GDE1-203ENST00000564172 PEA15Q15121 130 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 C10orf128Q5T292 105 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 C22orf42Q6IC83 251 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 RPL22L1Q6P5R6 122 aaKnown RBP15.56■□□□□ 0.08
GDE1-203ENST00000564172 AAED1Q7RTV5 226 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 FAM220AQ7Z4H9 259 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 C20orf196Q8IYI0 205 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 C15orf54Q8N8G6 183 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 OR6K3Q8NGY3 331 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 OR2A7Q96R45 310 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 OR8B4Q96RC9 309 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 TAAR6Q96RI8 345 aa15.56■□□□□ 0.08
GDE1-203ENST00000564172 IGKV3D-15A0A087WSY6 115 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 ACOD1A6NK06 481 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 RPP30P78346 268 aaKnown RBP15.55■□□□□ 0.08
GDE1-203ENST00000564172 INSL4Q14641 139 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 ATPAF1Q5TC12 328 aaPredicted RBP15.55■□□□□ 0.08
GDE1-203ENST00000564172 LINC00346Q8IVM7 164 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 RBMXL3Q8N7X1 1067 aaKnown RBP15.55■□□□□ 0.08
GDE1-203ENST00000564172 GHSRQ92847 366 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 SMIM19Q96E16 107 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 TOLLIPQ9H0E2 274 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 PIPOXQ9P0Z9 390 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 METTL21EPA6NDL7 271 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 BTBD17A6NE02 478 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 GABRPO00591 440 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 RPP14O95059 124 aaKnown RBP15.55■□□□□ 0.08
GDE1-203ENST00000564172 EDNRAP25101 427 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 ROM1Q03395 351 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 KCTD18Q6PI47 426 aaPredicted RBP15.55■□□□□ 0.08
GDE1-203ENST00000564172 ZNF679Q8IYX0 411 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 POM121Q96HA1 1249 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 CACNG6Q9BXT2 260 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 PRRG4Q9BZD6 226 aa15.55■□□□□ 0.08
GDE1-203ENST00000564172 TRBV2A0A0J9YWF9 115 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 PPIHO43447 177 aaKnown RBP15.54■□□□□ 0.08
GDE1-203ENST00000564172 PTBP3O95758 552 aaKnown RBP15.54■□□□□ 0.08
GDE1-203ENST00000564172 NANOS3P60323 173 aaKnown RBP15.54■□□□□ 0.08
GDE1-203ENST00000564172 DCXRQ7Z4W1 244 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 TGIF2LXQ8IUE1 241 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 OR52N5Q8NH56 324 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 ST7LQ8TDW4 575 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 HSD17B8Q92506 261 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 ULBP2Q9BZM5 246 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 ELOVL3Q9HB03 270 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 CAMK2AQ9UQM7 478 aa15.54■□□□□ 0.08
GDE1-203ENST00000564172 PHF3Q92576 2039 aaKnown RBP15.54■□□□□ 0.08
GDE1-203ENST00000564172 A0A1B0GVC2 190 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 DHHO43323 396 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 GALP22466 123 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 RAB5CP51148 216 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 KCNMB1Q16558 191 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 OR10J5Q8NHC4 309 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 RPS4Y2Q8TD47 263 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 HAVCR2Q8TDQ0 301 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 TMEM45BQ96B21 275 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 ABHD17AQ96GS6 310 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 CACNA1GO43497 2377 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 CD8B2A6NJW9 211 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 WNT11O96014 354 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 CD1AP06126 327 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 CD8BP10966 210 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 RCC1P18754 421 aaPredicted RBP15.53■□□□□ 0.08
GDE1-203ENST00000564172 ID4P47928 161 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 TRAM1Q15629 374 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 TBR1Q16650 682 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 KRBOX4Q5JUW0 171 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 SIAH3Q8IW03 269 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 BEST4Q8NFU0 473 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 ABHD4Q8TB40 342 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 CA5BP1Q8WTZ4 195 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 SLAMF9Q96A28 289 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 RBM24Q9BX46 236 aaKnown RBP15.53■□□□□ 0.08
GDE1-203ENST00000564172 CYSLTR2Q9NS75 346 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 ZNF629Q9UEG4 869 aaPredicted RBP15.53■□□□□ 0.08
GDE1-203ENST00000564172 FBXL3Q9UKT7 428 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms