RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 OR2M4Q96R27 311 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 EBNA1BP2Q99848 306 aaKnown RBP4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 KIFC1Q9BW19 673 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 HCAR1Q9BXC0 346 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 BARHL1Q9BZE3 327 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 PCBD2Q9H0N5 130 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 C6orf106Q9H6K1 298 aaPredicted RBP4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 RDH14Q9HBH5 336 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 PLGRKTQ9HBL7 147 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 CTPS2Q9NRF8 586 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 VAPAQ9P0L0 249 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 IL17CQ9P0M4 197 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 Q9UF83 564 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 NEU3Q9UQ49 428 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 MMACHCQ9Y4U1 282 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 OBSL1O75147 1896 aa4.29□□□□□ -1.72
VPS35P1-201ENST00000563400 A0A087X1B8 175 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 FTCDNL1E5RQL4 147 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 H3BQF6 201 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 CDC7O00311 574 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 TXNDC9O14530 226 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SOX15O60248 233 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PTTG1O95997 202 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 IGHV2-5P01817 119 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 CTSLP07711 333 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 TDGF1P13385 188 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 ZNF35P13682 527 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 ZNF250P15622 560 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SELEP16581 610 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SDC1P18827 310 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 DTYMKP23919 212 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 CRABP2P29373 138 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PTGDSP41222 190 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 MARCKSL1P49006 195 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 UGT2B15P54855 530 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 STXBP1P61764 594 aaKnown RBP4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 AESQ08117 197 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PDIA2Q13087 525 aaKnown RBP4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 P2RY6Q15077 328 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PGGHGQ32M88 737 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 HENMT1Q5T8I9 393 aaKnown RBP4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 APOOLQ6UXV4 268 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 C12orf54Q6X4T0 127 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 TMEM135Q86UB9 458 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 KLHDC8BQ8IXV7 354 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PIANPQ8IYJ0 282 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 ARRDC1Q8N5I2 433 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 ZNRF1Q8ND25 227 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PRSS33Q8NF86 280 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 OR2G2Q8NGZ5 317 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 LMX1AQ8TE12 382 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 C22orf15Q8WYQ4 148 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 AP3S1Q92572 193 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 FGF11Q92914 225 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 MS4A14Q96JA4 679 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SCGB3A2Q96PL1 93 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 RCHY1Q96PM5 261 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SORT1Q99523 831 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 RIOK2Q9BVS4 552 aaKnown RBP4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 OCIAD1Q9NX40 245 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SLC17A6Q9P2U8 582 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 SEC14L4Q9UDX3 406 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 OPN4Q9UHM6 478 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 ZNF107Q9UII5 783 aaPredicted RBP4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 KCNG2Q9UJ96 466 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 PYCARDQ9ULZ3 195 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 VDAC3Q9Y277 283 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 DOCK4Q8N1I0 1966 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 LAMA3Q16787 3333 aa4.28□□□□□ -1.72
VPS35P1-201ENST00000563400 KIR2DL5BA0A0G2JN68 375 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 KIR2DL5BA0A0G2JPC4 375 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 RPS10-NUDT3A0A1W2PQS6 291 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 SYCE1LA8MT33 242 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 DYNC1I1O14576 645 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TYROBPO43914 113 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 SHOX2O60902 331 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 NGFP01138 241 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 IGHV4-34P06331 123 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 C2P06681 752 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 PVRP15151 417 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 RPS3P23396 243 aaKnown RBP eCLIP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 MPGP29372 298 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ALDH3A1P30838 453 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 CEACAM8P31997 349 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 GPR183P32249 361 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TGFBR2P37173 567 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TFPI2P48307 235 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 SSR4P51571 173 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 GTF2A1P52655 376 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 AQP5P55064 265 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 IRF4Q15306 451 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TRIP13Q15645 432 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ZIC1Q15915 447 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ACSM3Q53FZ2 586 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 PDZD11Q5EBL8 140 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TECRLQ5HYJ1 363 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 IRAK1BP1Q5VVH5 260 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms