RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 LNX1Q8TBB1 728 aaPredicted RBP4.11□□□□□ -1.75
SMG1-207ENST00000563235 RGP1Q92546 391 aaPredicted RBP4.11□□□□□ -1.75
SMG1-207ENST00000563235 ZNF587Q96SQ5 575 aaPredicted RBP4.11□□□□□ -1.75
SMG1-207ENST00000563235 ZNF385DQ9H6B1 395 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 ACOT13Q9NPJ3 140 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 GKN1Q9NS71 199 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 TMEM74BQ9NUR3 256 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 MCUBQ9NWR8 336 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 PRODH2Q9UF12 536 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 Q9UF83 564 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 SIGLEC9Q9Y336 463 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 CACNA1SQ13698 1873 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 TANC1Q9C0D5 1861 aa4.11□□□□□ -1.75
SMG1-207ENST00000563235 FER1L6Q2WGJ9 1857 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 A0A0X1KG70 313 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 B5MCH6 92 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 MANBAO00462 879 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 P2RX6O15547 441 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 RGS14O43566 566 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 GNG7O60262 68 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 IGHG3P01860 377 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PLA2G1BP04054 148 aaKnown RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 C4BPBP20851 252 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 TNFSF9P41273 254 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 SULT1A1P50225 295 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 SULT1A2P50226 295 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 RUNX1Q01196 453 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 HLA-DRB5Q30154 266 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PLK5Q496M5 336 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 OGFOD2Q6N063 350 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 DOLPP1Q86YN1 238 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 RNF149Q8NC42 400 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 BEST4Q8NFU0 473 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 FGFBP3Q8TAT2 258 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 MYLIPQ8WY64 445 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 DCUN1D1Q96GG9 259 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 NARS2Q96I59 477 aaKnown RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 KAZALD1Q96I82 304 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 RBP7Q96R05 134 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PSMB7Q99436 277 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 TPSG1Q9NRR2 321 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 GLS2Q9UI32 602 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 MUTYHQ9UIF7 546 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 ING4Q9UNL4 249 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 SPIN1Q9Y657 262 aaPredicted RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 RGPD5Q99666 1765 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 AKAP11Q9UKA4 1901 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 C1QBP02746 253 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 RLN2P04090 185 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 VSIG10L2P0DP72 767 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 CTGFP29279 349 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 NTSP30990 170 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 RPS19P39019 145 aaKnown RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 MNDAP41218 407 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 NR4A2P43354 598 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 GLIPR1P48060 266 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 FOXG1P55316 489 aaPredicted RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 ISL1P61371 349 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 BIKQ13323 160 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 CEACAM21Q3KPI0 293 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 STEAP1BQ6NZ63 245 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 ZNF557Q8N988 423 aaPredicted RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 ACOT4Q8N9L9 421 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PPP3R2Q96LZ3 170 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 COL21A1Q96P44 957 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 FNDC4Q9H6D8 234 aaPredicted RBP4.1□□□□□ -1.75
SMG1-207ENST00000563235 A4GALTQ9NPC4 353 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 AKIP1Q9NQ31 210 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PTPRFP10586 1907 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 MYH3P11055 1940 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 CUL9Q8IWT3 2517 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 PAPPA2Q9BXP8 1791 aa4.1□□□□□ -1.75
SMG1-207ENST00000563235 NFASCO94856 1347 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.09□□□□□ -1.75
SMG1-207ENST00000563235 A0A1W2PPI3 338 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 TRIM49D1C9J1S8 452 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 H3BMQ9 156 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 HSD17B6O14756 317 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 FAM189A1O60320 539 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 CYP2D6P10635 497 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 GATA3P23771 443 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 ACRV1P26436 265 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 RAB25P57735 213 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 BTG1P62324 171 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 RGS1Q08116 209 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 GAGE5Q13069 117 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 GAGE6Q13070 117 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 MAD2L1Q13257 205 aaPredicted RBP4.09□□□□□ -1.75
SMG1-207ENST00000563235 FASTKQ14296 549 aaKnown RBP4.09□□□□□ -1.75
SMG1-207ENST00000563235 CDK10Q15131 360 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 SFRP4Q6FHJ7 346 aaPredicted RBP4.09□□□□□ -1.75
SMG1-207ENST00000563235 CD300LDQ6UXZ3 194 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 NAPRTQ6XQN6 538 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 Q6ZS46 218 aa4.09□□□□□ -1.75
SMG1-207ENST00000563235 MRPL52Q86TS9 123 aaKnown RBP4.09□□□□□ -1.75
SMG1-207ENST00000563235 ZADH2Q8N4Q0 377 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms