RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TMPRSS11AQ6ZMR5 421 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 FAM9CQ8IZT9 166 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 LINC00469Q8N7U9 141 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 OR4K5Q8NGD3 323 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 OR6N1Q8NGY5 312 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 C15orf40Q8WUR7 153 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 SRSF12Q8WXF0 261 aaKnown RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 CIDECQ96AQ7 238 aaPredicted RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 C8orf76Q96K31 380 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 ARL5BQ96KC2 179 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 KCNS1Q96KK3 526 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 RDH12Q96NR8 316 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 CAMK2N2Q96S95 79 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 RBBP8Q99708 897 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 GGTLC1Q9BX51 225 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC25A39Q9BZJ4 359 aaPredicted RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 OR51B5Q9H339 312 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 C1orf198Q9H425 327 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 GOLPH3Q9H4A6 298 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF442Q9H7R0 627 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 CSNK1G1Q9HCP0 422 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 C6orf50Q9HD87 102 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 IFT46Q9NQC8 304 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 NRBP2Q9NSY0 501 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 SDHAF2Q9NX18 166 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 ENPP5Q9UJA9 477 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 TBX21Q9UL17 535 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 FARSAQ9Y285 508 aaKnown RBP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 PPIL1Q9Y3C6 166 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 SBNO1A3KN83 1393 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 FHOD3Q2V2M9 1422 aa2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 AQRO60306 1485 aaKnown RBP eCLIP2.06□□□□□ -2.08
SHCBP1-202ENST00000563219 PCM1Q15154 2024 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 A0A0A6YYD5 115 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 TRAV8-4A0A0B4J246 113 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 HSBP1L1C9JCN9 74 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 GOLGA6L19H0YKK7 550 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 hCG_2039718K7EN88 272 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SNAI2O43623 268 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 RAD1O60671 282 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 ALOX12BO75342 701 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 GCM2O75603 506 aaPredicted RBP2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 VAPBO95292 243 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 PTHP01270 115 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 TRBV12-3P01733 135 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 P01737 135 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 APCSP02743 223 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 RD3LP0DJH9 198 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 IGHV1-8P0DP01 117 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 NQO2P16083 231 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 PRKACBP22694 351 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 PAX6P26367 422 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 LOXP28300 417 aaPredicted RBP2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 APLNRP35414 380 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 GFERP55789 205 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 MTPNP58546 118 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 TAS2R60P59551 318 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 ESRRGP62508 458 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 RPL18AQ02543 176 aaKnown RBP2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 INCA1Q0VD86 236 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 STX4Q12846 297 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 DMC1Q14565 340 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 AVPI1Q5T686 147 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 Q6P435 159 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 FAHD1Q6P587 224 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 Q6ZSR6 202 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 DAW1Q8N136 415 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 Q8N9L7 120 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 C19orf18Q8NEA5 215 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 FAM104AQ969W3 186 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 CATSPER2Q96P56 530 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SDHCQ99643 169 aaPredicted RBP2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 NDFIP1Q9BT67 221 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SPZ1Q9BXG8 430 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SAMD10Q9BYL1 202 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 ULBP2Q9BZM5 246 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SYT4Q9H2B2 425 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 VCXQ9H320 206 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 DDIT4Q9NX09 232 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 EMC3Q9P0I2 261 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 MRM2Q9UI43 246 aaKnown RBP2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 VAX2Q9UIW0 290 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 PRELID1Q9Y255 219 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SIGLEC7Q9Y286 467 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 SIGLEC9Q9Y336 463 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 ATP6V1DQ9Y5K8 247 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 ORC6Q9Y5N6 252 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 WIF1Q9Y5W5 379 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 JCADQ9P266 1359 aa2.05□□□□□ -2.08
SHCBP1-202ENST00000563219 IGLV4-69A0A075B6H9 119 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ANKRD20A5PA0PJZ0 165 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ISPDA4D126 451 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 RSPH10B2B2RC85 870 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 NACAE9PAV3 2078 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 LINC01619G3V211 115 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 J3QT63 122 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CHST10O43529 356 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 NDUFS6O75380 124 aaKnown RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CTDNEP1O95476 244 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 RPN2P04844 631 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms