RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 LCN2P80188 198 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 ELAVL3Q14576 367 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 ZNF260Q3ZCT1 412 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 XKR7Q5GH72 579 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 GJD3Q8N144 294 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 NECAP1Q8NC96 275 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 OR8G5Q8NG78 346 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 NEIL3Q8TAT5 605 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 THEM6Q8WUY1 208 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 HSH2DQ96JZ2 352 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 HIST1H2AAQ96QV6 131 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 MBNL3Q9NUK0 354 aaKnown RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 WRAP73Q9P2S5 460 aaPredicted RBP8.33□□□□□ -1.08
CDH1-205ENST00000562836 ERG28Q9UKR5 140 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 IKZF2Q9UKS7 526 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 SCML2Q9UQR0 700 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 NME7Q9Y5B8 376 aa8.33□□□□□ -1.08
CDH1-205ENST00000562836 F5H768 121 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 MATN4O95460 622 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 OPN1SWP03999 348 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 H3F3AP84243 136 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 DGCR2P98153 550 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 SRSF2Q01130 221 aaKnown RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 FUT7Q11130 342 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 DHRS2Q13268 280 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 CPZQ66K79 652 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 TMEM211Q6ICI0 200 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 FAHD1Q6P587 224 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 SLC25A26Q70HW3 274 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 TCTEX1D1Q8N7M0 179 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 FADS6Q8N9I5 356 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 OR10G9Q8NGN4 311 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 OR10Q1Q8NGQ4 319 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 LMLNQ96KR4 655 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ZFP3Q96NJ6 502 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 NXF5Q9H1B4 397 aaKnown RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 RNF39Q9H2S5 420 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ISG20L2Q9H9L3 353 aaKnown RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 NMRAL1Q9HBL8 299 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 CBLCQ9ULV8 474 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 DAPP1Q9UN19 280 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ABCA3Q99758 1704 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 TNRC6CQ9HCJ0 1690 aaKnown RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 C8orf89P0DMQ9 161 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 PRTN3P24158 256 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 AK4P27144 223 aaPredicted RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 GABRA5P31644 462 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 SNCAP37840 140 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 IL2P60568 153 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ERVK11-1P61568 191 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 RHOAP61586 193 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 HIST1H3AP68431 136 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 MLLT11Q13015 90 aaPredicted RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 ZNF154Q13106 437 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ACSM6Q6P461 480 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 NIPAL3Q6P499 406 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ARL9Q6T311 187 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 CFAP52Q8N1V2 620 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 GPR32P1Q8NGA4 272 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 OR5AP2Q8NGF4 316 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 SCAMP5Q8TAC9 235 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 GPR119Q8TDV5 335 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 COA7Q96BR5 231 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 ATXN7L3BQ96GX2 97 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 MRPL16Q9NX20 251 aaKnown RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 TMEM161AQ9NX61 479 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 TAS2R5Q9NYW4 299 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 B4GALT7Q9UBV7 327 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 GPR132Q9UNW8 380 aa8.32□□□□□ -1.08
CDH1-205ENST00000562836 AK6Q9Y3D8 172 aaKnown RBP8.32□□□□□ -1.08
CDH1-205ENST00000562836 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 F5H5K5 113 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 SLC17A3O00476 420 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 C4BPAP04003 597 aaKnown RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 GBAP04062 536 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 EIF4EP06730 217 aaKnown RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 EFNA5P52803 228 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 COL10A1Q03692 680 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 SRSF4Q08170 494 aaKnown RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 EXOSC7Q15024 291 aaKnown RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 CD300EQ496F6 205 aaPredicted RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 TMEM42Q69YG0 159 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 TEX43Q6ZNM6 134 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 Q7L0L9 218 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 CTU1Q7Z7A3 348 aaKnown RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 OR5AR1Q8NGP9 310 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 OR4X1Q8NH49 305 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 TMEM174Q8WUU8 243 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 ST6GALNAC6Q969X2 333 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 FEVQ99581 238 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 PSMG3Q9BT73 122 aaPredicted RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 JKAMPQ9P055 326 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 B3GALT5Q9Y2C3 310 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 NHSQ6T4R5 1651 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 MBLAC1A4D2B0 266 aaPredicted RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 MSCO60682 206 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms