RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 FOXH1O75593 365 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 LRATO95237 230 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FGF19O95750 216 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TOMM40O96008 361 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 IGHV2-5P01817 119 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ALPLP05186 524 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CSN3P07498 182 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 IL6RP08887 468 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ARSBP15848 533 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FCARP24071 287 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 IGFBP6P24592 240 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PRDX3P30048 256 aaKnown RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 NBL1P41271 181 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ZFP36L2P47974 494 aaKnown RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PGGT1BP53609 377 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SLURP1P55000 103 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TMPRSS3P57727 454 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TCTAP57738 103 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 OR10A3P58181 314 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TAS2R43P59537 309 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PSG6Q00889 435 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 GPR17Q13304 367 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 KIR2DS1Q14954 304 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SLC10A1Q14973 349 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 RSU1Q15404 277 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 LY6KQ17RY6 165 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PYY3Q5JQD4 70 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ACTL10Q5JWF8 245 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FAM72AQ5TYM5 149 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 HECTD2Q5U5R9 776 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 C9orf57Q5W0N0 161 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 OR4A47Q6IF82 309 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FAM72DQ6L9T8 149 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 GOLGA7Q7Z5G4 137 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 DEFB128Q7Z7B8 93 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 B3GNT8Q7Z7M8 397 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 GGNQ86UU5 652 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FAM72BQ86X60 149 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PDZD9Q8IXQ8 264 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TDHQ8IZJ6 230 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TCTE3Q8IZS6 198 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 LRRC25Q8N386 305 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 BPIFB6Q8NFQ5 453 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 HAVCR2Q8TDQ0 301 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 Q8WTZ3 238 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 MYLPFQ96A32 169 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 GALMQ96C23 342 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 RAB39BQ96DA2 213 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SCRN2Q96FV2 425 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 AURKBQ96GD4 344 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SMIM8Q96KF7 97 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CAPNS2Q96L46 248 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SGK494Q96LW2 274 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CCDC115Q96NT0 180 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TSSK2Q96PF2 358 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 HIST1H2AAQ96QV6 131 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 C20orf144Q9BQM9 153 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SULT4A1Q9BR01 284 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 ABHD14AQ9BUJ0 271 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 PECRQ9BY49 303 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CST9LQ9H4G1 147 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TBC1D17Q9HA65 648 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 RDH14Q9HBH5 336 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 GPR35Q9HC97 309 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 LANCL2Q9NS86 450 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 B3GAT1Q9P2W7 334 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 GNG12Q9UBI6 72 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 FTSJ1Q9UET6 329 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 UBQLN1Q9UMX0 589 aaKnown RBP4.82□□□□□ -1.64
CAPN3-211ENST00000562199 SIGLEC9Q9Y336 463 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 CITO14578 2027 aa4.82□□□□□ -1.64
CAPN3-211ENST00000562199 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 KIR2DS3K7RE56 304 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 PIRO00625 290 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 P2RX6O15547 441 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 ORC5O43913 435 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 SLC16A7O60669 478 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 MRPS14O60783 128 aaKnown RBP4.81□□□□□ -1.64
CAPN3-211ENST00000562199 C1RP00736 705 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
CAPN3-211ENST00000562199 CTSLP07711 333 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 SNRPCP09234 159 aaKnown RBP4.81□□□□□ -1.64
CAPN3-211ENST00000562199 PRSS56P0CW18 603 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 HOXB6P17509 224 aaKnown RBP4.81□□□□□ -1.64
CAPN3-211ENST00000562199 IDSP22304 550 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 HIST1H1TP22492 207 aaPredicted RBP4.81□□□□□ -1.64
CAPN3-211ENST00000562199 MPZP25189 248 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 CERS1P27544 350 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 APLNRP35414 380 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 DCTP40126 519 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 GLP1RP43220 463 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 BDKRB1P46663 353 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 TAF6P49848 677 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 TCL1AP56279 114 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 PIGPP57054 158 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 CLRN1P58418 232 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 TAS2R50P59544 299 aa4.81□□□□□ -1.64
CAPN3-211ENST00000562199 KRTAP10-2P60368 255 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms