RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CDK5R1Q15078 307 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 HFEQ30201 348 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 GFOD2Q3B7J2 385 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 CEACAM21Q3KPI0 293 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 OR2G6Q5TZ20 316 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
CDH1-204ENST00000562118 TMPRSS11AQ6ZMR5 421 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 AHSA2Q719I0 299 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 NANOGP1Q8N7R0 232 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 FAM71F1Q96KD3 344 aaPredicted RBP11.31□□□□□ -0.6
CDH1-204ENST00000562118 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 UBAP1Q9NZ09 502 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 ENPP5Q9UJA9 477 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 PPP1R3CQ9UQK1 317 aa11.31□□□□□ -0.6
CDH1-204ENST00000562118 TMEM210A6NLX4 147 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 CLDN25C9JDP6 229 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 LHBP01229 141 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 FAHP16930 419 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 USF1P22415 310 aaPredicted RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 THBS2P35442 1172 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 BDH1Q02338 343 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 ZNF154Q13106 437 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 MED21Q13503 144 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 MPPED2Q15777 294 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 RBM48Q5RL73 367 aaKnown RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 DMKNQ6E0U4 476 aaPredicted RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 RGP1Q92546 391 aaPredicted RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 SGCDQ92629 289 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 HPS1Q92902 700 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 DVL3Q92997 716 aaPredicted RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 PGLYRP3Q96LB9 341 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 CHST5Q9GZS9 411 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 BABAM2Q9NXR7 383 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
CDH1-204ENST00000562118 ABCA1O95477 2261 aa11.3□□□□□ -0.6
CDH1-204ENST00000562118 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.29□□□□□ -0.6
CDH1-204ENST00000562118 A0A1B0GVI7 797 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 ZNF850A8MQ14 1090 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 SYT7O43581 403 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 CDC14BO60729 498 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 INHBBP09529 407 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 GPR6P46095 362 aaPredicted RBP11.29□□□□□ -0.6
CDH1-204ENST00000562118 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
CDH1-204ENST00000562118 GBX2P52951 348 aaPredicted RBP11.29□□□□□ -0.6
CDH1-204ENST00000562118 WNT4P56705 351 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 LMO4P61968 165 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 TMEM155Q4W5P6 130 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 CLVS2Q5SYC1 327 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 PRAMEF6Q5VXH4 476 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 ZNF529Q6P280 563 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 UTS2BQ765I0 119 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 PRSS48Q7RTY5 328 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 BIVMQ86UB2 503 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 MOGAT3Q86VF5 341 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 RDH10Q8IZV5 341 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 OR51A4Q8NGJ6 313 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 PP6455Q8WZ26 134 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 C14orf119Q9NWQ9 140 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 HHLA2Q9UM44 414 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 TPRKBQ9Y3C4 175 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
CDH1-204ENST00000562118 PQLC2LA1A4F0 135 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 ANXA2P2A6NMY6 339 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 F5H0A9 414 aaPredicted RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 TNFRSF13BO14836 293 aaPredicted RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 WNT9BO14905 357 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 TPD52L2O43399 206 aaKnown RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 PLPP2O43688 288 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 LMX1BO60663 402 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 MRPS14O60783 128 aaKnown RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 ALX3O95076 343 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 NRASP01111 189 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 MT-ND2P03891 347 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 CPT2P23786 658 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 MPZP25189 248 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 GNALP38405 381 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 CHN2P52757 468 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 CDH15P55291 814 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 TAS2R43P59537 309 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 GABARAPL2P60520 117 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH1-204ENST00000562118 HNRNPA0Q13151 305 aaKnown RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 TMEM249Q2WGJ8 235 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 LRRC28Q86X40 367 aaPredicted RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 STX19Q8N4C7 294 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms