RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 MICU1Q9BPX6 476 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 PAPOLGQ9BWT3 736 aaKnown RBP17.19■□□□□ 0.34
TPM1-232ENST00000561425 CLN8Q9UBY8 286 aa17.19■□□□□ 0.34
TPM1-232ENST00000561425 SAC3D1A6NKF1 404 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 A6NLC8 198 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 TMEM210A6NLX4 147 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 ZNF850A8MQ14 1090 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 C3orf80F5H4A9 247 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 FCN3O75636 299 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 BAG2O95816 211 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 MAP2K3P46734 347 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 CSNK2BP67870 215 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 RCN1Q15293 331 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 SLC25A30Q5SVS4 291 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 ZNF684Q5T5D7 378 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 ZBTB37Q5TC79 503 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 OR10Z1Q8NGY1 313 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 TRUB1Q8WWH5 349 aaKnown RBP17.18■□□□□ 0.34
TPM1-232ENST00000561425 PPP1R14AQ96A00 147 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 EME1Q96AY2 570 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 APOL4Q9BPW4 351 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 MRI1Q9BV20 369 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 MRM2Q9UI43 246 aaKnown RBP17.18■□□□□ 0.34
TPM1-232ENST00000561425 NUP50Q9UKX7 468 aa17.18■□□□□ 0.34
TPM1-232ENST00000561425 ANXA2P2A6NMY6 339 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 SRRM5B3KS81 715 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 CDIPTO14735 213 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 TTRP02766 147 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 MUC1P15941 1255 aaPredicted RBP17.17■□□□□ 0.34
TPM1-232ENST00000561425 MFGE8Q08431 387 aaPredicted RBP17.17■□□□□ 0.34
TPM1-232ENST00000561425 ZNF829Q3KNS6 432 aaPredicted RBP17.17■□□□□ 0.34
TPM1-232ENST00000561425 BTNL3Q6UXE8 466 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 LRRC29Q8WV35 223 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 PIGCQ92535 297 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 HRASLS5Q96KN8 279 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 RTL8AQ9BWD3 113 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 RIBC2Q9H4K1 309 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 ERVK-18Q9QC07 812 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 R4GMQ9 66 aa17.17■□□□□ 0.34
TPM1-232ENST00000561425 ZNF816-ZNF321PA0A0X1KG74 233 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 C22orf46C9J442 243 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 MAGEB4O15481 346 aaPredicted RBP17.16■□□□□ 0.34
TPM1-232ENST00000561425 OR2T7P0C7T2 308 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 FPR2P25090 351 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 POU4F2Q12837 409 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 ATPAF1Q5TC12 328 aaPredicted RBP17.16■□□□□ 0.34
TPM1-232ENST00000561425 ELMOD2Q8IZ81 293 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 PQLC1Q8N2U9 271 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 BOLLQ8N9W6 283 aaKnown RBP17.16■□□□□ 0.34
TPM1-232ENST00000561425 OR2T27Q8NH04 317 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 OR51E1Q8TCB6 317 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 C12orf43Q96C57 262 aaKnown RBP17.16■□□□□ 0.34
TPM1-232ENST00000561425 SLC6A7Q99884 636 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 NUDT16L1Q9BRJ7 211 aaKnown RBP17.16■□□□□ 0.34
TPM1-232ENST00000561425 SUCNR1Q9BXA5 334 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 DCLRE1BQ9H816 532 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 MOB1AQ9H8S9 216 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 GPR84Q9NQS5 396 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 IKZF2Q9UKS7 526 aa17.16■□□□□ 0.34
TPM1-232ENST00000561425 STAB1Q9NY15 2570 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 hCG_1807616A0A1W2PRN6 198 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 ZNF670-ZNF695F2Z2N8 137 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 ADAM20O43506 726 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 PLATP00750 562 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 GYPAP02724 150 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 AMY2BP19961 511 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 ALDH3A2P51648 485 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 RIPPLY1Q0D2K3 151 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 CEACAM21Q3KPI0 293 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 CD276Q5ZPR3 534 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 C9orf139Q6ZV77 190 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 SSX6Q7RTT6 188 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 ZDHHC23Q8IYP9 409 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 SCCPDHQ8NBX0 429 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 OR51G2Q8NGK0 314 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 UBE2FQ969M7 185 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 RNF170Q96K19 258 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 OR51I2Q9H344 312 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 SMURF1Q9HCE7 757 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 ZNF69Q9UC07 566 aa17.15■□□□□ 0.34
TPM1-232ENST00000561425 A0A1B0GTI1 187 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 A0A1W2PQL4 384 aaPredicted RBP17.14■□□□□ 0.33
TPM1-232ENST00000561425 EI24O14681 340 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 LIPFP07098 398 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 TGM4P49221 684 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 CDC42P60953 191 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 MICBQ29980 383 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 ARMCX4Q5H9R4 360 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 TMEM42Q69YG0 159 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 ZDHHC22Q8N966 263 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 OR5A2Q8NGI9 324 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 FAM216AQ8WUB2 273 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 RPL3LQ92901 407 aaKnown RBP17.14■□□□□ 0.33
TPM1-232ENST00000561425 JMJD8Q96S16 334 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 TTTY10Q9BZA0 68 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 SNX5Q9Y5X3 404 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 V9GYS6 101 aa17.14■□□□□ 0.33
TPM1-232ENST00000561425 DHRS7CA6NNS2 312 aa17.13■□□□□ 0.33
TPM1-232ENST00000561425 LOC110117498-PIK3R3F6TDL0 507 aa17.13■□□□□ 0.33
TPM1-232ENST00000561425 ENSAO43768 121 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms