RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 KPTNQ9Y664 436 aa9.57□□□□□ -0.88
USP3-220ENST00000561381 B2RBV5 119 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 ACKR3P25106 362 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 GSTT1P30711 240 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 BLVRAP53004 296 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 GNGT1P63211 74 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 KLRD1Q13241 179 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 TAF9Q16594 264 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 STUMQ69YW2 141 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 TIGD4Q8IY51 512 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 Q8N7P7 452 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 OR10G2Q8NGC3 310 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 OR52H1Q8NGJ2 320 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 RPL3LQ92901 407 aaKnown RBP9.56□□□□□ -0.88
USP3-220ENST00000561381 PGAM5Q96HS1 289 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 LYZL4Q96KX0 146 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 TLNRD1Q9H1K6 362 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 OR10A2Q9H208 303 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 OR51V1Q9H2C8 321 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 MAGIXQ9H6Y5 334 aa9.56□□□□□ -0.88
USP3-220ENST00000561381 PRPF19Q9UMS4 504 aaKnown RBP9.56□□□□□ -0.88
USP3-220ENST00000561381 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 ZNF850A8MQ14 1090 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 RNASEK-C17orf49H0YIS7 233 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 NDUFB3O43676 98 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 SELENOFO60613 162 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 TIPRLO75663 272 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 DCTN3O75935 186 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 GLCEO94923 617 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 H2BFMP0C1H6 154 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 GNALP38405 381 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 TGM4P49221 684 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 PROK1P58294 105 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 PRDX4Q13162 271 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 C11orf91Q3C1V1 193 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 ASPHD2Q6ICH7 369 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 LCN8Q6JVE9 175 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 CD300LDQ6UXZ3 194 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 Q6ZSV7 163 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 SLC36A1Q7Z2H8 476 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 DHFR2Q86XF0 187 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 PNKDQ8N490 385 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 GALNT4Q8N4A0 578 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 TEX47Q8TBZ9 253 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 FEVQ99581 238 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 DCTN5Q9BTE1 182 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 HAO2Q9NYQ3 351 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 KLHDC2Q9Y2U9 406 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
USP3-220ENST00000561381 ANXA2P2A6NMY6 339 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 H3BN98 237 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 AKR7A2O43488 359 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 CLPXO76031 633 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 CFL1P23528 166 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 NAA10P41227 235 aaPredicted RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 IL5RAQ01344 420 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 TRIM25Q14258 630 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 OCLNQ16625 522 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 DGUOKQ16854 277 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 FAM98BQ52LJ0 330 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 DMRTC1Q5HYR2 192 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 PLBD1Q6P4A8 553 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 METAP1DQ6UB28 335 aaPredicted RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 SHFQ7M4L6 423 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 TMEM179BQ7Z7N9 219 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 ZSCAN4Q8NAM6 433 aaPredicted RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 CSNK2A3Q8NEV1 391 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 GIPC3Q8TF64 312 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 THEM6Q8WUY1 208 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 HPSE2Q8WWQ2 592 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 OR5P3Q8WZ94 311 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 H1FXQ92522 213 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 TNFRSF14Q92956 283 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 C12orf43Q96C57 262 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 GAFA1Q96PS6 74 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 RAB3IPQ96QF0 476 aaPredicted RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 PKP2Q99959 881 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 MICU1Q9BPX6 476 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 RBM4BQ9BQ04 359 aaKnown RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 SP140LQ9H930 580 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 ELL3Q9HB65 397 aaPredicted RBP9.54□□□□□ -0.88
USP3-220ENST00000561381 ZNRD1Q9P1U0 126 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 ZNF391Q9UJN7 358 aa9.54□□□□□ -0.88
USP3-220ENST00000561381 M0QZ24 198 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 TIMM23O14925 209 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 NPFFO15130 113 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 ATP8B1O43520 1251 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 RHBDL1O75783 438 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 TSPAN15O95858 294 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 CST4P01036 141 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 APOC1P02654 83 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 LYNP07948 512 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 POU1F1P28069 291 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 DCTDP32321 178 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 LRRC10Q5BKY1 277 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 ATPAF1Q5TC12 328 aaPredicted RBP9.53□□□□□ -0.88
USP3-220ENST00000561381 GDPGP1Q6ZNW5 385 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 ZNF788Q6ZQV5 615 aa9.53□□□□□ -0.88
USP3-220ENST00000561381 KCTD8Q6ZWB6 473 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms