RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 DHDDSQ86SQ9 333 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ZBTB8BQ8NAP8 495 aaPredicted RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 OR8U1Q8NH10 309 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 OR1F12Q8NHA8 337 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 BBS10Q8TAM1 723 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 TCP10LQ8TDR4 215 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 SEH1LQ96EE3 360 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 MALSU1Q96EH3 234 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 MED30Q96HR3 178 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ALG12Q9BV10 488 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ST6GALNAC5Q9BVH7 336 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 SLC22A4Q9H015 551 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 ELL3Q9HB65 397 aaPredicted RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 SLCO1B3Q9NPD5 702 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 POLE4Q9NR33 117 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 SNTG1Q9NSN8 517 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 MRPL15Q9P015 296 aaKnown RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 DCDC2Q9UHG0 476 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 BTNL2Q9UIR0 455 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 EMCNQ9ULC0 261 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 HILPDAQ9Y5L2 63 aa4.16□□□□□ -1.74
HERC1-213ENST00000561359 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
HERC1-213ENST00000561359 TNCP24821 2201 aa4.15□□□□□ -1.74
HERC1-213ENST00000561359 C5orf58C9J3I9 102 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 PTBP3O95758 552 aaKnown RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 TFF1P04155 84 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 FGF4P08620 206 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 PGA5P0DJD9 388 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 GP9P14770 177 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 SPNP16150 400 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 CNTFRP26992 372 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 GRK5P34947 590 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 AQP2P41181 271 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 MTNR1BP49286 362 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 DYNLT3P51808 116 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 CAV3P56539 151 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 EMX2Q04743 252 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 MZT1Q08AG7 82 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 LRRC74AQ0VAA2 488 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 MALLQ13021 153 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 SEC23BQ15437 767 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 DGUOKQ16854 277 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 WHAMMP3Q1A5X7 153 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 CCDC153Q494R4 210 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 ARMC4Q5T2S8 1044 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 ATPAF1Q5TC12 328 aaPredicted RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 TTC33Q6PID6 262 aaPredicted RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 ZNF782Q6ZMW2 699 aaPredicted RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 FOXL2NBQ6ZUU3 175 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 C16orf82Q7Z2V1 217 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 MRPL21Q7Z2W9 205 aaKnown RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 CPLX4Q7Z7G2 160 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 FNDC8Q8TC99 324 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 ACMSDQ8TDX5 336 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 CHAC2Q8WUX2 184 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 ST8SIA2Q92186 375 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 SLCO4A1Q96BD0 722 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 TESCQ96BS2 214 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 C12orf43Q96C57 262 aaKnown RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 MNTQ99583 582 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 SLC25A33Q9BSK2 321 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 WACQ9BTA9 647 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 YIPF3Q9GZM5 350 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 RAB17Q9H0T7 212 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 C14orf119Q9NWQ9 140 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 THUMPD1Q9NXG2 353 aaKnown RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 ING3Q9NXR8 418 aa4.15□□□□□ -1.75
HERC1-213ENST00000561359 TBL2Q9Y4P3 447 aaKnown RBP4.15□□□□□ -1.75
HERC1-213ENST00000561359 A0A1W2PPH5 198 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 CXorf65A6NEN9 183 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 GGT3PA6NGU5 568 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 CD300LBA8K4G0 201 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 FAM90A22PA8MWA6 464 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 HMGB1P1B2RPK0 211 aaPredicted RBP4.14□□□□□ -1.75
HERC1-213ENST00000561359 E9PBE3 544 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 H3BSH0 61 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.14□□□□□ -1.75
HERC1-213ENST00000561359 NDUFAB1O14561 156 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 RFXANKO14593 260 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 RER1O15258 196 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 CHP2O43745 196 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 TPST1O60507 370 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 PLIN3O60664 434 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 TPST2O60704 377 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 ATP6V1G2O95670 118 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 CD24P25063 80 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 NAA10P41227 235 aaPredicted RBP4.14□□□□□ -1.75
HERC1-213ENST00000561359 GABRA2P47869 451 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 POU3F4P49335 361 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 ENTPD1P49961 510 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 CAPZA1P52907 286 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 SLC25A1P53007 311 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 NME5P56597 212 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 GNGT1P63211 74 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 CSNK2BP67870 215 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 SLC35B1P78383 322 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 AQP6Q13520 282 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 HAGHQ16775 308 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 LDLRAD2Q5SZI1 272 aa4.14□□□□□ -1.75
HERC1-213ENST00000561359 RNLSQ5VYX0 342 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms