RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 GABRG1Q8N1C3 465 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 ACBD4Q8NC06 268 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TMEM104Q8NE00 496 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 OR10R2Q8NGX6 335 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TNFAIP8L1Q8WVP5 186 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 PIGTQ969N2 578 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 TMEM59Q9BXS4 323 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 CST11Q9H112 138 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 MRPL15Q9P015 296 aaKnown RBP11.17□□□□□ -0.62
SNX1-211ENST00000560829 KCNN3Q9UGI6 736 aa11.17□□□□□ -0.62
SNX1-211ENST00000560829 ZNF107Q9UII5 783 aaPredicted RBP11.17□□□□□ -0.62
SNX1-211ENST00000560829 FIGNL2A6NMB9 653 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 NRASP01111 189 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 CCL2P13500 99 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
SNX1-211ENST00000560829 RBP2P50120 134 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 UCNP55089 124 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 ACTBP60709 375 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 ACTG1P63261 375 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 GUCA2AQ02747 115 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 CD300CQ08708 224 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 CARTPTQ16568 116 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 RTL6Q6ICC9 239 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 BTN2A1Q7KYR7 527 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 FAM89BQ8N5H3 189 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 HPS1Q92902 700 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 STARD4Q96DR4 205 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 GAL3ST1Q99999 423 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 URM1Q9BTM9 101 aaKnown RBP11.16□□□□□ -0.62
SNX1-211ENST00000560829 FAM215AQ9Y5M1 114 aa11.16□□□□□ -0.62
SNX1-211ENST00000560829 A0A0A6YYD4 124 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 HMX3A6NHT5 357 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 RAD51DO75771 328 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 MPIG6BO95866 241 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 WNT5AP41221 380 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 FUT6P51993 359 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 MTCP1P56278 107 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 UBE2NP61088 152 aaKnown RBP11.15□□□□□ -0.62
SNX1-211ENST00000560829 RPS27AP62979 156 aaKnown RBP11.15□□□□□ -0.62
SNX1-211ENST00000560829 PCGF3Q3KNV8 242 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 DMRTC1Q5HYR2 192 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 TMEM255AQ5JRV8 349 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 ASCL4Q6XD76 172 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 C1QL2Q7Z5L3 287 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 SLC30A7Q8NEW0 376 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 FAM57AQ8TBR7 257 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 MS4A3Q96HJ5 214 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 ACTR6Q9GZN1 396 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 NUDT15Q9NV35 164 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 STARD10Q9Y365 291 aa11.15□□□□□ -0.62
SNX1-211ENST00000560829 LYZL6O75951 148 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 TOXO94900 526 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 CST4P01036 141 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 NGFP01138 241 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 HOXD4P09016 255 aaPredicted RBP11.15□□□□□ -0.63
SNX1-211ENST00000560829 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.63
SNX1-211ENST00000560829 TIMP3P35625 211 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 VEGFCP49767 419 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 CCR6P51684 374 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 PRSS12P56730 875 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 TMPRSS3P57727 454 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 CDNFQ49AH0 187 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 C1orf185Q5T7R7 199 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 Q6ZTK2 550 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 MRPL21Q7Z2W9 205 aaKnown RBP11.15□□□□□ -0.63
SNX1-211ENST00000560829 C17orf78Q8N4C9 275 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 Q8NA96 180 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 CSNK2A3Q8NEV1 391 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 OR56B1Q8NGI3 324 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 EXTL1Q92935 676 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 NICN1Q9BSH3 213 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 TM2D1Q9BX74 207 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 LUZP4Q9P127 313 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 ING4Q9UNL4 249 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 PROCRQ9UNN8 238 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 SLC7A11Q9UPY5 501 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 ALG5Q9Y673 324 aa11.15□□□□□ -0.63
SNX1-211ENST00000560829 IGKV1-27A0A075B6S5 117 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 A0A1W2PP11 408 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 C7orf66A4D0T2 115 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 TMEM235A6NFC5 223 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 FOXI3A8MTJ6 420 aaPredicted RBP11.14□□□□□ -0.63
SNX1-211ENST00000560829 DLL1O00548 723 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 CRTAPO75718 401 aaPredicted RBP11.14□□□□□ -0.63
SNX1-211ENST00000560829 DHFRP00374 187 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 TPOP07202 933 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 GSTP1P09211 210 aaKnown RBP11.14□□□□□ -0.63
SNX1-211ENST00000560829 PSMB1P20618 241 aaKnown RBP11.14□□□□□ -0.63
SNX1-211ENST00000560829 TDGF1P3P51864 188 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 PER3P56645 1201 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 P2RY6Q15077 328 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 TBC1D28Q2M2D7 210 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 SLC22A6Q4U2R8 563 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 CD163Q86VB7 1156 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms