RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 DUX4L2P0CJ85 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4L3P0CJ86 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4L4P0CJ87 422 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4L5P0CJ88 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4L6P0CJ89 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4L7P0CJ90 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 IRF2P14316 349 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 GABRB1P18505 474 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 RBM34P42696 430 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 GSSP48637 474 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 CRISP1P54107 249 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 GP2P55259 537 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 CDC42P60953 191 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 KLRD1Q13241 179 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 AQP6Q13520 282 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 FHL1Q13642 323 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DGCR6Q14129 220 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 SEC23BQ15437 767 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 SMN1Q16637 294 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 NSUN5P1Q3KNT7 163 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 CDONQ4KMG0 1287 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 CCDC92Q53HC0 331 aaPredicted RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 PGBD2Q6P3X8 592 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4L9Q6RFH8 374 aaPredicted RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 METAP1DQ6UB28 335 aaPredicted RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 PRSS48Q7RTY5 328 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 PNKDQ8N490 385 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 CELF2-AS1Q8N7Q2 184 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 TMEM239Q8WW34 195 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 RORBQ92753 470 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 RASD2Q96D21 266 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 RBP7Q96R05 134 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 BCL7BQ9BQE9 202 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 WACQ9BTA9 647 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 FNDC11Q9BVV2 318 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 NAA50Q9GZZ1 169 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 SIRT7Q9NRC8 400 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 IMPAD1Q9NX62 359 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 DUX4Q9UBX2 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 WARS2Q9UGM6 360 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 PSORS1C1Q9UIG5 152 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 RPUSD1Q9UJJ7 312 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 A4GNTQ9UNA3 340 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 KPTNQ9Y664 436 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 STAB2Q8WWQ8 2551 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 A0A1W2PRD5 423 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 A0A1W2PRF3 423 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 A0A1W2PRM7 423 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 ANKRD61A6NGH8 418 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 DVL1O14640 695 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 RER1O15258 196 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 MPZL2O60487 215 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 GASTP01350 101 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 GYPAP02724 150 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 OSMP13725 252 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 CTLA4P16410 223 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 SAA4P35542 130 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 MAP2K4P45985 399 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 RGS6P49758 472 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 CTXN1P60606 82 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 EMX1Q04741 257 aaPredicted RBP8.1□□□□□ -1.11
TPM1-225ENST00000560679 SLX4IPQ5VYV7 408 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 CRIP3Q6Q6R5 217 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 CD300LDQ6UXZ3 194 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 AHSA2Q719I0 299 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 FAM90A1Q86YD7 464 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 Q8N7P7 452 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 LY6G5BQ8NDX9 201 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 OR4S1Q8NGB4 309 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 OR11L1Q8NGX0 322 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 OR5R1Q8NH85 324 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 OR1F12Q8NHA8 337 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 FNDC8Q8TC99 324 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 FCGR1BQ92637 280 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 MYDGFQ969H8 173 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 ERGIC1Q969X5 290 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 TMEM100Q9NV29 134 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 FKBP14Q9NWM8 211 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 ATPIF1Q9UII2 106 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 ENPP5Q9UJA9 477 aa8.1□□□□□ -1.11
TPM1-225ENST00000560679 TRAV27A0A087WT01 109 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 A0A1B0GVI7 797 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 WI2-2373I1.2A0A1W2PRP0 233 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 EFCAB10A6NFE3 127 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 OOEPA6NGQ2 149 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 H3BUX3 64 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 NPFFO15130 113 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 CHST1O43916 411 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 INMTO95050 263 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 PTBP3O95758 552 aaKnown RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 FADS2O95864 444 aaKnown RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 VSIG10L2P0DP72 767 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 CD28P10747 220 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 IGLL1P15814 213 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 GUCA1AP43080 201 aaPredicted RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 KIR2DS4P43632 304 aa8.09□□□□□ -1.11
TPM1-225ENST00000560679 SNRPGP62308 76 aaKnown RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 PIN1Q13526 163 aaPredicted RBP8.09□□□□□ -1.11
TPM1-225ENST00000560679 TRAM2Q15035 370 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms