RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ALOX5APP20292 161 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 IL5RAQ01344 420 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 SRSF4Q08170 494 aaKnown RBP8.44□□□□□ -1.06
LDLR-214ENST00000560628 APOFQ13790 326 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 FLOT2Q14254 428 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 PDCD1Q15116 288 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 SNAPC1Q16533 368 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 DMRTC1Q5HYR2 192 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 TRPM8Q7Z2W7 1104 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 KRT77Q7Z794 578 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 KIR3DL3Q8N743 410 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 OR8B12Q8NGG6 310 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 OR5P3Q8WZ94 311 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 ITPKCQ96DU7 683 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 PKP2Q99959 881 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 RTL8AQ9BWD3 113 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 CHIAQ9BZP6 476 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 FGF23Q9GZV9 251 aaPredicted RBP8.44□□□□□ -1.06
LDLR-214ENST00000560628 WDR13Q9H1Z4 485 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 RGCCQ9H4X1 137 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 NOX4Q9NPH5 578 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 ACOXLQ9NUZ1 547 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 ONECUT1Q9UBC0 465 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 DNAJB9Q9UBS3 223 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 RPUSD1Q9UJJ7 312 aaKnown RBP8.44□□□□□ -1.06
LDLR-214ENST00000560628 LAMP5Q9UJQ1 280 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 MPC1Q9Y5U8 109 aa8.44□□□□□ -1.06
LDLR-214ENST00000560628 A0A0U1RQK1 487 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 A0A1W2PRD5 423 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 A0A1W2PRF3 423 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 A0A1W2PRM7 423 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 PRODHO43272 600 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 AKR7A2O43488 359 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 NDUFB3O43676 98 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 CST4P01036 141 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 MRPL3P09001 348 aaKnown RBP8.43□□□□□ -1.06
LDLR-214ENST00000560628 SLC2A5P22732 501 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 TGM4P49221 684 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 DLX1P56177 255 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 SNCBQ16143 134 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 CDONQ4KMG0 1287 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 SLC35D3Q5M8T2 416 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 SLC36A1Q7Z2H8 476 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 VMO1Q7Z5L0 202 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 FTMTQ8N4E7 242 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 SCCPDHQ8NBX0 429 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 FAM81AQ8TBF8 368 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 H1FXQ92522 213 aaKnown RBP8.43□□□□□ -1.06
LDLR-214ENST00000560628 PPP1R14AQ96A00 147 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
LDLR-214ENST00000560628 FAM71F1Q96KD3 344 aaPredicted RBP8.43□□□□□ -1.06
LDLR-214ENST00000560628 HIST1H2AAQ96QV6 131 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 TEAD3Q99594 435 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 TEX12Q9BXU0 123 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 TTTY10Q9BZA0 68 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 TLNRD1Q9H1K6 362 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 YY1AP1Q9H869 796 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 HAO2Q9NYQ3 351 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 ZNF391Q9UJN7 358 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 POMPQ9Y244 141 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 LRP12Q9Y561 859 aa8.43□□□□□ -1.06
LDLR-214ENST00000560628 TMEM269A0A1B0GVZ9 245 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 TCRBV3S1A0A5B6 114 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 CCDC182A6NF36 153 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 WIPF1O43516 503 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 IGHV4-59P01825 116 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 DAPP51397 102 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 GPM6AP51674 278 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 CRISP1P54107 249 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 RAG2P55895 527 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 PSMA6P60900 246 aaKnown RBP8.42□□□□□ -1.06
LDLR-214ENST00000560628 RELBQ01201 579 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 DNAL1Q4LDG9 190 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 LRRC10Q5BKY1 277 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 CEP78Q5JTW2 689 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 PRR31Q5SQ13 230 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 ATPAF1Q5TC12 328 aaPredicted RBP8.42□□□□□ -1.06
LDLR-214ENST00000560628 STUMQ69YW2 141 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 MOB3CQ70IA8 216 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 BCDIN3DQ7Z5W3 292 aaKnown RBP8.42□□□□□ -1.06
LDLR-214ENST00000560628 COMMD2Q86X83 199 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 ZDHHC23Q8IYP9 409 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 PAPD5Q8NDF8 572 aaKnown RBP8.42□□□□□ -1.06
LDLR-214ENST00000560628 LY6G5BQ8NDX9 201 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 OR10Z1Q8NGY1 313 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 TBC1D15Q8TC07 691 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 BCAS4Q8TDM0 211 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 HPSE2Q8WWQ2 592 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 RAB3IPQ96QF0 476 aaPredicted RBP8.42□□□□□ -1.06
LDLR-214ENST00000560628 YIPF3Q9GZM5 350 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 SEMA6AQ9H2E6 1030 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 ZNF696Q9H7X3 374 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 NIPAL2Q9H841 368 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 SLC25A19Q9HC21 320 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 SIRT7Q9NRC8 400 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 PAPOLBQ9NRJ5 636 aaKnown RBP8.42□□□□□ -1.06
LDLR-214ENST00000560628 C1RLQ9NZP8 487 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 KPTNQ9Y664 436 aa8.42□□□□□ -1.06
LDLR-214ENST00000560628 TMEM210A6NLX4 147 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms