RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TIMM29Q9BSF4 260 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 ACTR3CQ9C0K3 210 aaPredicted RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR10A2Q9H208 303 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 FKRPQ9H9S5 495 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 C1orf123Q9NWV4 160 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 OR5AC2Q9NZP5 309 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC23A2Q9UGH3 650 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 APOBEC3BQ9UH17 382 aaKnown RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC45A2Q9UMX9 530 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 KLHDC2Q9Y2U9 406 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 TMED7Q9Y3B3 224 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 RHBDD3Q9Y3P4 386 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 COLEC10Q9Y6Z7 277 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 SPACA6W5XKT8 324 aa5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 TCF20Q9UGU0 1960 aaKnown RBP5.27□□□□□ -1.57
SNRPA1-209ENST00000560307 CCDC187A0A096LP49 1063 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 A0A1B0GVT2 93 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 A0A1W2PPE2 198 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 A0A1W2PS29 197 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SMCO3A2RU48 225 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF860A6NHJ4 632 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 K7EPK0 472 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 PEX12O00623 359 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CLDN4O14493 209 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 NARSO43776 548 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 GPR137BO60478 399 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF354AO60765 605 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CA11O75493 328 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 DEDDO75618 318 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CNOT4O95628 575 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 GCGP01275 180 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 LINC00614P0C842 121 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF888P0CJ79 500 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 C6P13671 934 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 FOLR1P15328 257 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 RPL12P30050 165 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CCKBRP32239 447 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CDKN2AP42771 156 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 RPS10P46783 165 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 P2RY1P47900 373 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CAMLGP49069 296 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 NDUFA6P56556 154 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 LINC00310P59036 64 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 BTG2P78543 158 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SKP2Q13309 424 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 JOSD1Q15040 202 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ARL6IP1Q15041 203 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 UBE2V2Q15819 145 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 TMEM176BQ3YBM2 270 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 C14orf28Q4W4Y0 310 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 MIDNQ504T8 468 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 GPR157Q5UAW9 335 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 AGBL4Q5VU57 503 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 TXNDC8Q6A555 127 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 RTL6Q6ICC9 239 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC18B1Q6NT16 456 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 RPUSD3Q6P087 351 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 DEGS2Q6QHC5 323 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 KIRREL2Q6UWL6 708 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CLEC18BQ6UXF7 455 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC35D2Q76EJ3 337 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC35E3Q7Z769 313 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CATSPERDQ86XM0 798 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 C2orf73Q8N5S3 287 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF614Q8N883 585 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 LINC00482Q8N8I6 264 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 LMNTD1Q8N9Z9 388 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SUMF2Q8NBJ7 301 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 HSD17B11Q8NBQ5 300 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ADAD2Q8NCV1 583 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR2L3Q8NG85 312 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR5T3Q8NGG3 340 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR51L1Q8NGJ5 315 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR10G4Q8NGN3 311 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR10D4PQ8NGN7 298 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR6N2Q8NGY6 317 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR10AC1Q8NH08 325 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF563Q8TA94 476 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 EMG1Q92979 244 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 MR1Q95460 341 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 TMEM230Q96A57 120 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 ISOC2Q96AB3 205 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC25A36Q96CQ1 311 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 NTNG2Q96CW9 530 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 RASD2Q96D21 266 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 FBXO17Q96EF6 278 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 IGSF21Q96ID5 467 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 CMKLR1Q99788 373 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 KXD1Q9BQD3 176 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 HEYLQ9NQ87 328 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 OR2S2Q9NQN1 319 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 TMEM242Q9NWH2 141 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 FBXL17Q9UF56 701 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 PITPNC1Q9UKF7 332 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 HHLA2Q9UM44 414 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 FARSAQ9Y285 508 aaKnown RBP5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 HEBP2Q9Y5Z4 205 aa5.26□□□□□ -1.57
SNRPA1-209ENST00000560307 HEATR5BQ9P2D3 2071 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms