RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 DUX4L4P0CJ87 422 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 DUX4L5P0CJ88 424 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 DUX4L6P0CJ89 424 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 DUX4L7P0CJ90 424 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 GMFBP60983 142 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 IL5RAQ01344 420 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 PAX8Q06710 450 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 MZT1Q08AG7 82 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 ZNF829Q3KNS6 432 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 LIPNQ5VXI9 398 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 DUX4L9Q6RFH8 374 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 NLRC3Q7RTR2 1065 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 COMMD2Q86X83 199 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 SEMA6DQ8NFY4 1073 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 FAM81AQ8TBF8 368 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 RAB40AQ8WXH6 277 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 RNF170Q96K19 258 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 MBOAT4Q96T53 435 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 SLC29A1Q99808 456 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 MICU1Q9BPX6 476 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 RTL8AQ9BWD3 113 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 TLNRD1Q9H1K6 362 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 S100A14Q9HCY8 104 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 USE1Q9NZ43 259 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 DUX4Q9UBX2 424 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 CLN8Q9UBY8 286 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 NUFIP1Q9UHK0 495 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 GTF2A1LQ9UNN4 478 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 SLC22A13Q9Y226 551 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 MPC1Q9Y5U8 109 aa9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 SOX21Q9Y651 276 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-216ENST00000560243 IGHV3OR16-10A0A075B7F0 116 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 TRAV38-1A0A0B4J264 116 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 KIR2DS1A0A191URI9 304 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 A0A1B0GTI1 187 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 LOC110117498-PIK3R3F6TDL0 507 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 ENTPD6O75354 484 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 RPP14O95059 124 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 TFF1P04155 84 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 FAHP16930 419 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 AMY2BP19961 511 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 CPT2P23786 658 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 MAP2K3P46734 347 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 ALDH3A2P51648 485 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 GPM6AP51674 278 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 EGR3Q06889 387 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 CEP78Q5JTW2 689 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 ZNF684Q5T5D7 378 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 BCL2L15Q5TBC7 163 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 TEX36Q5VZQ5 186 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 KCTD8Q6ZWB6 473 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 ZDHHC23Q8IYP9 409 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 BCL6BQ8N143 479 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 FTMTQ8N4E7 242 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 TEX29Q8N6K0 151 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 SCCPDHQ8NBX0 429 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 OR10H4Q8NGA5 316 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 HRASLS5Q96KN8 279 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 TECTBQ96PL2 329 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 MNTQ99583 582 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 NUDT16L1Q9BRJ7 211 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 MRI1Q9BV20 369 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 WDR13Q9H1Z4 485 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 RNPEPL1Q9HAU8 725 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 ZNF69Q9UC07 566 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 ZNF391Q9UJN7 358 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 OR52A1Q9UKL2 312 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 R4GMQ9 66 aa9.68□□□□□ -0.86
RABGGTA-216ENST00000560243 FBN3Q75N90 2809 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 A6NIN4 97 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 H3BSH0 61 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 P2RY10O00398 339 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 PHYHO14832 338 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 OR2T7P0C7T2 308 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 CDC42P60953 191 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ZNF85Q03923 595 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 SNCBQ16143 134 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ARMCX4Q5H9R4 360 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 FAM76BQ5HYJ3 339 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 WDR38Q5JTN6 314 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 KRT74Q7RTS7 529 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ELMOD2Q8IZ81 293 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 PQLC1Q8N2U9 271 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 YIPF7Q8N8F6 280 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 OR5T2Q8NGG2 359 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 OR2T27Q8NH04 317 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 RNF166Q96A37 237 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 CCL13Q99616 98 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ESM1Q9NQ30 184 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 SNTG1Q9NSN8 517 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 IMPAD1Q9NX62 359 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 PIGLQ9Y2B2 252 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 ORC6Q9Y5N6 252 aa9.67□□□□□ -0.86
RABGGTA-216ENST00000560243 METTL15A6NJ78 407 aa9.66□□□□□ -0.86
RABGGTA-216ENST00000560243 TMEM210A6NLX4 147 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms