RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ZNF671Q8TAW3 534 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 H1FXQ92522 213 aaKnown RBP10.42□□□□□ -0.74
SNX1-209ENST00000559961 DYRK2Q92630 601 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 C1orf147Q96MC9 270 aaPredicted RBP10.42□□□□□ -0.74
SNX1-209ENST00000559961 MROQ9BYG7 248 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 PRDM13Q9H4Q3 707 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 HAO2Q9NYQ3 351 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 H2AFY2Q9P0M6 372 aaPredicted RBP10.42□□□□□ -0.74
SNX1-209ENST00000559961 CTSZQ9UBR2 303 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 RPUSD1Q9UJJ7 312 aaKnown RBP10.42□□□□□ -0.74
SNX1-209ENST00000559961 TMEM14AQ9Y6G1 99 aa10.42□□□□□ -0.74
SNX1-209ENST00000559961 hCG_38984A0A1B0GV85 526 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 A0A1W2PQ09 198 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 ACOD1A6NK06 481 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 ZNF850A8MQ14 1090 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 TIMM23O14925 209 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 GYG2O15488 501 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 MELTFP08582 738 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 FBP1P09467 338 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 PRDX4Q13162 271 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 FLOT2Q14254 428 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 SNAPC1Q16533 368 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 DNAL1Q4LDG9 190 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 LINC01590Q5TEZ4 76 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 RUSC1-AS1Q66K80 236 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 OLFML2AQ68BL7 652 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 WDR82Q6UXN9 313 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 CPOQ8IVL8 374 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 DNAJC9Q8WXX5 260 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 TBX15Q96SF7 602 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 SOX21Q9Y651 276 aaPredicted RBP10.41□□□□□ -0.74
SNX1-209ENST00000559961 ARHGAP32A7KAX9 2087 aa10.41□□□□□ -0.74
SNX1-209ENST00000559961 ZNF816-ZNF321PA0A0X1KG74 233 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 A0A1W2PPH5 198 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 C5orf63A6NC05 138 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 M0QZ24 198 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 MTRF1O75570 445 aaKnown RBP10.4□□□□□ -0.74
SNX1-209ENST00000559961 NDUFA7O95182 113 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 CST4P01036 141 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 NDUFB7P17568 137 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 GLRA1P23415 457 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 GABRA2P47869 451 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 CAPZA1P52907 286 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 CSNK2BP67870 215 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 WDR38Q5JTN6 314 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 VMO1Q7Z5L0 202 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 PDZD9Q8IXQ8 264 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 KIR3DL3Q8N743 410 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 CANT1Q8WVQ1 401 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 ASB17Q8WXJ9 295 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 PKP2Q99959 881 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 CHIAQ9BZP6 476 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 SIRPDQ9H106 197 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 SMURF1Q9HCE7 757 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 VNN3Q9NY84 501 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 TVP23BQ9NYZ1 205 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 DNAJB9Q9UBS3 223 aa10.4□□□□□ -0.74
SNX1-209ENST00000559961 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.4□□□□□ -0.74
SNX1-209ENST00000559961 TMEM269A0A1B0GVZ9 245 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 CLPSL1A2RUU4 121 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 SELENOFO60613 162 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 PSKH1P11801 424 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 MMP9P14780 707 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 ATP6V1B1P15313 513 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 PSMA6P60900 246 aaKnown RBP10.39□□□□□ -0.75
SNX1-209ENST00000559961 GNG3P63215 75 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 CBX1P83916 185 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 RIPPLY1Q0D2K3 151 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 APOFQ13790 326 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 ZNF829Q3KNS6 432 aaPredicted RBP10.39□□□□□ -0.75
SNX1-209ENST00000559961 ATPAF1Q5TC12 328 aaPredicted RBP10.39□□□□□ -0.75
SNX1-209ENST00000559961 NCR3LG1Q68D85 454 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 DEGS2Q6QHC5 323 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 ADGRG5Q8IZF4 528 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 OR5T2Q8NGG2 359 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 OR5P3Q8WZ94 311 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 RPL3LQ92901 407 aaKnown RBP10.39□□□□□ -0.75
SNX1-209ENST00000559961 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 YIPF3Q9GZM5 350 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 TLNRD1Q9H1K6 362 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 SNTG1Q9NSN8 517 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 TAS2R1Q9NYW7 299 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 SLC25A10Q9UBX3 287 aaPredicted RBP10.39□□□□□ -0.75
SNX1-209ENST00000559961 IKZF2Q9UKS7 526 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 RNF114Q9Y508 228 aa10.39□□□□□ -0.75
SNX1-209ENST00000559961 A0A0U1RQK1 487 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 hCG_1809904A0A1W2PP81 198 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 A0A1W2PPE2 198 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 A0A1W2PR64 198 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 A0A1W2PRV1 198 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 H0YAE9 185 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 ACOT8O14734 319 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 ZNF254O75437 659 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 GPM6AP51674 278 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 RIDAP52758 137 aaKnown RBP10.38□□□□□ -0.75
SNX1-209ENST00000559961 ESRRGP62508 458 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms