RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 FLNCQ14315 2725 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 ANKRD30BLA7E2S9 258 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 ZNF850A8MQ14 1090 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 HCKP08631 526 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 OCMP0CE72 109 aaPredicted RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 ZNF93P35789 620 aaPredicted RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 PRDX4Q13162 271 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 MSMPQ1L6U9 139 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 ALKBH6Q3KRA9 238 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 MZT2AQ6P582 158 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 SLC22A25Q6T423 547 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 MOB3CQ70IA8 216 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 PLPPR2Q96GM1 343 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 SORCS2Q96PQ0 1159 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 STEAP1Q9UHE8 339 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 GPR160Q9UJ42 338 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 PURGQ9UJV8 347 aaKnown RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 MPC1Q9Y5U8 109 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 PEX16Q9Y5Y5 336 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 ICE1Q9Y2F5 2266 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.43□□□□□ -0.74
HERC1-205ENST00000559886 WIPF3A6NGB9 483 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 PRKACBP22694 351 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 PEX19P40855 299 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 KISS1Q15726 138 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 PLCXD3Q63HM9 321 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 CRIP3Q6Q6R5 217 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 RNF144BQ7Z419 303 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 OR6M1Q8NGM8 313 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 SLC25A28Q96A46 364 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 SPACA5Q96QH8 159 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 NKX3-1Q99801 234 aaPredicted RBP10.43□□□□□ -0.74
HERC1-205ENST00000559886 MRI1Q9BV20 369 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 CNTD2Q9H8S5 307 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 LIN7BQ9HAP6 207 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 NEK6Q9HC98 313 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 COMMD3Q9UBI1 195 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 RALYQ9UKM9 306 aaKnown RBP10.43□□□□□ -0.74
HERC1-205ENST00000559886 FZR1Q9UM11 496 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 A0A0B4J203 849 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 PAHP00439 452 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 CALCBP10092 127 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 HTR2CP28335 458 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 FUT6P51993 359 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 CLDN12P56749 244 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 RAB11BQ15907 218 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 BEX5Q5H9J7 111 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 ZDHHC23Q8IYP9 409 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 SLC7A11Q9UPY5 501 aa10.43□□□□□ -0.74
HERC1-205ENST00000559886 ROS1P08922 2347 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 USP9XQ93008 2570 aaPredicted RBP10.42□□□□□ -0.74
HERC1-205ENST00000559886 RGS5O15539 181 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 UBR5O95071 2799 aaPredicted RBP10.42□□□□□ -0.74
HERC1-205ENST00000559886 IGHV3-13P01766 116 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 SNRPBP14678 240 aaKnown RBP10.42□□□□□ -0.74
HERC1-205ENST00000559886 S100A5P33763 92 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 RIN1Q13671 783 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 CEACAM21Q3KPI0 293 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 ADAM5Q6NVV9 412 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 VHLLQ6RSH7 139 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 OR8G5Q8NG78 346 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 OR4D6Q8NGJ1 314 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 ZNF671Q8TAW3 534 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 TRMT10AQ8TBZ6 339 aaKnown RBP10.42□□□□□ -0.74
HERC1-205ENST00000559886 HPSE2Q8WWQ2 592 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 MIXL1Q9H2W2 232 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 ZNF442Q9H7R0 627 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 ABCB9Q9NP78 766 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 CA10Q9NS85 328 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 SPATA2Q9UM82 520 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 CMAHPQ9Y471 501 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 IGLV3-9A0A075B6K5 115 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 SHISA9B4DS77 424 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 SIAH2O43255 324 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 TIMM8AO60220 97 aaPredicted RBP10.42□□□□□ -0.74
HERC1-205ENST00000559886 CD3EP07766 207 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 CA6P23280 308 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 RBP2P50120 134 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 MTCP1P56278 107 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 SCAND1P57086 179 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 LHFPL2Q6ZUX7 228 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 LAX1Q8IWV1 398 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 DMRTC2Q8IXT2 367 aaPredicted RBP10.42□□□□□ -0.74
HERC1-205ENST00000559886 OR5A2Q8NGI9 324 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 OR5H6Q8NGV6 325 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 BORCS8Q96FH0 119 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 OR5V1Q9UGF6 321 aa10.42□□□□□ -0.74
HERC1-205ENST00000559886 IGKV1-27A0A075B6S5 117 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 FAM230AA0A1W2PPH8 454 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 DEFB108AA8MXU0 73 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 PYCARD-AS1I3L0S3 204 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 IGFBP2P18065 325 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 KIR2DL3P43628 341 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 KLF3P57682 345 aaPredicted RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 P2RY14Q15391 338 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 MOGQ16653 247 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms