RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CRHBPP24387 322 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 GPR6P46095 362 aaPredicted RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 TGM4P49221 684 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 CCR9P51686 369 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 LMO4P61968 165 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ALKBH1Q13686 389 aaKnown RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 CDK5R1Q15078 307 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ZMYND11Q15326 602 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ZNF181Q2M3W8 571 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 TMEM249Q2WGJ8 235 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 FAM76BQ5HYJ3 339 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 CEP78Q5JTW2 689 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 RNF144BQ7Z419 303 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 FAM220AQ7Z4H9 259 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 C19orf18Q8NEA5 215 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 SEMA6DQ8NFY4 1073 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 OR1M1Q8NGA1 313 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 C1orf159Q96HA4 380 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 CNBD2Q96M20 576 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ZNF184Q99676 751 aaPredicted RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 PDCD1LG2Q9BQ51 273 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 EGLN1Q9GZT9 426 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 VCX3BQ9H321 246 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 DUSP21Q9H596 190 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 NARFLQ9H6Q4 476 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 METTL17Q9H7H0 456 aaPredicted RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 UFSP2Q9NUQ7 469 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ERVK-18Q9QC07 812 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 PIGLQ9Y2B2 252 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 CAB39Q9Y376 341 aaPredicted RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 EXOSC1Q9Y3B2 195 aaKnown RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.6□□□□□ -0.872e-7■■■■□ 23.1
SNX1-204ENST00000559061 IGKV1-27A0A075B6S5 117 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 IGKV1-9A0A0C4DH69 117 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 DHRS7CA6NNS2 312 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 FAM157AC9JC47 383 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 OGG1O15527 345 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 PPIHO43447 177 aaKnown RBP9.6□□□□□ -0.87
SNX1-204ENST00000559061 ZNF205O95201 554 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 ATP6V1B1P15313 513 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 TNFSF4P23510 183 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 MAP2K3P46734 347 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 HSPA13P48723 471 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 SRP9P49458 86 aaKnown RBP9.6□□□□□ -0.87
SNX1-204ENST00000559061 TMEM33P57088 247 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 RPS11P62280 158 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNX1-204ENST00000559061 RIPPLY1Q0D2K3 151 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 UBE2V2Q15819 145 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 HFEQ30201 348 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 ZBTB37Q5TC79 503 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 RNLSQ5VYX0 342 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
SNX1-204ENST00000559061 DOK3Q7L591 496 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 COMMD2Q86X83 199 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 KLBQ86Z14 1044 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 EGFL6Q8IUX8 553 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 ZFP41Q8N8Y5 198 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 OR52N1Q8NH53 320 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 GATAD2BQ8WXI9 593 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 PIGCQ92535 297 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 PGLYRP3Q96LB9 341 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 SLC22A4Q9H015 551 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 GPR173Q9NS66 373 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 MPC1Q9Y5U8 109 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 NPTNQ9Y639 398 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
SNX1-204ENST00000559061 ARHGAP32A7KAX9 2087 aa9.6□□□□□ -0.87
SNX1-204ENST00000559061 TLN2Q9Y4G6 2542 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 IRGMA1A4Y4 181 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 CLDN25C9JDP6 229 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 TNFRSF13BO14836 293 aaPredicted RBP9.59□□□□□ -0.87
SNX1-204ENST00000559061 SYT7O43581 403 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 DENRO43583 198 aaKnown RBP9.59□□□□□ -0.87
SNX1-204ENST00000559061 LHBP01229 141 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 MT-ND2P03891 347 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 GRPP07492 148 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 CCDC159P0C7I6 412 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 UBCP0CG48 685 aaKnown RBP9.59□□□□□ -0.87
SNX1-204ENST00000559061 TNFRSF1AP19438 455 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 WDR82Q6UXN9 313 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 Q71RC1 249 aaPredicted RBP9.59□□□□□ -0.87
SNX1-204ENST00000559061 ZDHHC23Q8IYP9 409 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 KLHL36Q8N4N3 616 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 NANOGP1Q8N7R0 232 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 ZNF540Q8NDQ6 660 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 OR13C5Q8NGS8 318 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 RPL3LQ92901 407 aaKnown RBP9.59□□□□□ -0.87
SNX1-204ENST00000559061 SEH1LQ96EE3 360 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 OR5M11Q96RB7 305 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 CDCA4Q9BXL8 241 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 OR51I2Q9H344 312 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 C1orf123Q9NWV4 160 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 ENPP5Q9UJA9 477 aa9.59□□□□□ -0.87
SNX1-204ENST00000559061 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
SNX1-204ENST00000559061 A0A1B0GVI7 797 aa9.58□□□□□ -0.88
SNX1-204ENST00000559061 PQLC2LA1A4F0 135 aa9.58□□□□□ -0.88
SNX1-204ENST00000559061 PTGES3LE9PB15 166 aa9.58□□□□□ -0.88
SNX1-204ENST00000559061 F5H0A9 414 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms