RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 STK38LQ9Y2H1 464 aa2.69□□□□□ -1.98
CASC4-206ENST00000558847 TSSC4Q9Y5U2 329 aaPredicted RBP2.69□□□□□ -1.98
CASC4-206ENST00000558847 NPHP4O75161 1426 aaPredicted RBP2.68□□□□□ -1.98
CASC4-206ENST00000558847 LRP4O75096 1905 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 IGHV3-72A0A0B4J1Y9 119 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 TRAV8-4A0A0B4J246 113 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 IGHV2OR16-5A0A0B4J2B6 119 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 C7orf66A4D0T2 115 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 ALOX12BO75342 701 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 SCO1O75880 301 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 CCNE2O96020 404 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 P01737 135 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 APOA1P02647 267 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 OR5AL1P0C617 328 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 LINC00869P0C866 280 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 MUC1P15941 1255 aaPredicted RBP2.68□□□□□ -1.98
CASC4-206ENST00000558847 BGNP21810 368 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 CXCR1P25024 350 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 PRSS3P35030 304 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 DEKP35659 375 aaKnown RBP2.68□□□□□ -1.98
CASC4-206ENST00000558847 PAFAH1B2P68402 229 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 RNASE13Q5GAN3 156 aaKnown RBP2.68□□□□□ -1.98
CASC4-206ENST00000558847 TEX30Q5JUR7 227 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 OPN5Q6U736 354 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 ASCL4Q6XD76 172 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 SHISA6Q6ZSJ9 500 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 PID1Q7Z2X4 250 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 ZNF695Q8IW36 515 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 OR8K3Q8NH51 312 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 OR1L1Q8NH94 360 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 LRRC20Q8TCA0 184 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 C17orf50Q8WW18 174 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 ING5Q8WYH8 240 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 CFAP53Q96M91 514 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 ZNF442Q9H7R0 627 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 SIRT7Q9NRC8 400 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 HEBP1Q9NRV9 189 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 NDRG2Q9UN36 371 aaKnown RBP2.68□□□□□ -1.98
CASC4-206ENST00000558847 SLC7A11Q9UPY5 501 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 KLF12Q9Y4X4 402 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 V9GYY9 64 aa2.68□□□□□ -1.98
CASC4-206ENST00000558847 IGHV3-49A0A0A0MS15 119 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 A0A0A6YYD5 115 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 TRAV40A0A0B4J280 105 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 ANKRD20A5PA0PJZ0 165 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 TMEM150BA6NC51 233 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 PSMD11O00231 422 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 RFXANKO14593 260 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 SMC2O95347 1197 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 TRBV12-3P01733 135 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 IL4P05112 153 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 MMP7P09237 267 aaPredicted RBP2.67□□□□□ -1.98
CASC4-206ENST00000558847 HTR2CP28335 458 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 POLR2IP36954 125 aaKnown RBP2.67□□□□□ -1.98
CASC4-206ENST00000558847 PSMB2P49721 201 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 UBE2E1P51965 193 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 MTPNP58546 118 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 INCA1Q0VD86 236 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 EIF4EBP2Q13542 120 aaPredicted RBP2.67□□□□□ -1.98
CASC4-206ENST00000558847 PDCL2Q8N4E4 241 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 OR6K2Q8NGY2 324 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 OR13G1Q8NGZ3 307 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 OR51A7Q8NH64 312 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 RXFP2Q8WXD0 754 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 FAM19A4Q96LR4 140 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 UBE2E2Q96LR5 201 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 OR4K3Q96R72 315 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 RNF5Q99942 180 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 ARV1Q9H2C2 271 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 ANKHQ9HCJ1 492 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 FBXO8Q9NRD0 319 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 VAPAQ9P0L0 249 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 OPN4Q9UHM6 478 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 SIGLEC7Q9Y286 467 aa2.67□□□□□ -1.98
CASC4-206ENST00000558847 PLA2R1Q13018 1463 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 ZNF879B4DU55 563 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 GMDSO60547 372 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 VAPBO95292 243 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 PSMB5P28074 263 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 DSTNP60981 165 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 PITPNAQ00169 270 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 ZNF816Q0VGE8 651 aaPredicted RBP2.66□□□□□ -1.98
CASC4-206ENST00000558847 FBXO48Q5FWF7 155 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 ZNF880Q6PDB4 577 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 CA13Q8N1Q1 262 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 SPERTQ8NA61 448 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 NECAP1Q8NC96 275 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 Q96MT0 163 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 NAPGQ99747 312 aaPredicted RBP2.66□□□□□ -1.98
CASC4-206ENST00000558847 MAP1LC3CQ9BXW4 147 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 ULBP2Q9BZM5 246 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 SYT4Q9H2B2 425 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 RAB23Q9ULC3 237 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 CBY1Q9Y3M2 126 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 LRRC42Q9Y546 428 aa2.66□□□□□ -1.98
CASC4-206ENST00000558847 AHDC1Q5TGY3 1603 aaPredicted RBP2.65□□□□□ -1.98
CASC4-206ENST00000558847 ZNF850A8MQ14 1090 aa2.65□□□□□ -1.99
CASC4-206ENST00000558847 BOLA2-SMG1P6H3BVE0 249 aa2.65□□□□□ -1.99
CASC4-206ENST00000558847 M0R1X1 148 aa2.65□□□□□ -1.99
CASC4-206ENST00000558847 ZNF593O00488 134 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms