RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SLC25A28Q96A46 364 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 NRBF2Q96F24 287 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 TEAD3Q99594 435 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 YIPF3Q9GZM5 350 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 FGF23Q9GZV9 251 aaPredicted RBP9.88□□□□□ -0.83
HERC1-202ENST00000558324 NIPAL2Q9H841 368 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 RNPEPL1Q9HAU8 725 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 SNTG1Q9NSN8 517 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 IKZF2Q9UKS7 526 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 GTF2A1LQ9UNN4 478 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 COPS3Q9UNS2 423 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 MPC1Q9Y5U8 109 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 TMEM269A0A1B0GVZ9 245 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 G3V2T6 193 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 HOXA3O43365 443 aaPredicted RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 TFF1P04155 84 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 RNASE1P07998 156 aaKnown RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 HKR1P10072 659 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 SELLP14151 372 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 EPHA2P29317 976 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 ARF6P62330 175 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 MFGE8Q08431 387 aaPredicted RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 IKZF1Q13422 519 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 ATP6AP1Q15904 470 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 C1orf146Q5VVC0 180 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 METTL11BQ5VVY1 283 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 KCTD18Q6PI47 426 aaPredicted RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 C9orf139Q6ZV77 190 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 AMIGO2Q86SJ2 522 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 PDZD9Q8IXQ8 264 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 ZDHHC23Q8IYP9 409 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 TCEANCQ8N8B7 351 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 OR5T2Q8NGG2 359 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 OR5P3Q8WZ94 311 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 RNF170Q96K19 258 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 FAM71F1Q96KD3 344 aaPredicted RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 WDFY2Q96P53 400 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 IL4I1Q96RQ9 567 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 CNN2Q99439 309 aaKnown RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 MROQ9BYG7 248 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 PRRG3Q9BZD7 231 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 WDR13Q9H1Z4 485 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 ZMAT3Q9HA38 289 aaKnown RBP9.87□□□□□ -0.83
HERC1-202ENST00000558324 FAM206AQ9NX38 181 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 DNAJB11Q9UBS4 358 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 PCDHGB1Q9Y5G3 927 aa9.87□□□□□ -0.83
HERC1-202ENST00000558324 TMEM210A6NLX4 147 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 SRRM5B3KS81 715 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 P2RY10O00398 339 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 MAGEB4O15481 346 aaPredicted RBP9.86□□□□□ -0.83
HERC1-202ENST00000558324 AKR7A2O43488 359 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 CST4P01036 141 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 LIPFP07098 398 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 MMP9P14780 707 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 MUC1P15941 1255 aaPredicted RBP9.86□□□□□ -0.83
HERC1-202ENST00000558324 FASP25445 335 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 MAP2K3P46734 347 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 GPM6AP51674 278 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 ESRRGP62508 458 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 FOXL1Q12952 345 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 CEP78Q5JTW2 689 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 PLEKHG7Q6ZR37 379 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 SLC36A1Q7Z2H8 476 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 THAP5Q7Z6K1 395 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 SCCPDHQ8NBX0 429 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 OR51E1Q8TCB6 317 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 LRTOMTQ8WZ04 291 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 LHX4Q969G2 390 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 PPP1R14AQ96A00 147 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 HIST1H2AAQ96QV6 131 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 OR8B4Q96RC9 309 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 PBOV1Q9GZY1 135 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 TLNRD1Q9H1K6 362 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 ABCB9Q9NP78 766 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 GPR84Q9NQS5 396 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 H2AFY2Q9P0M6 372 aaPredicted RBP9.86□□□□□ -0.83
HERC1-202ENST00000558324 ONECUT1Q9UBC0 465 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 RPUSD1Q9UJJ7 312 aaKnown RBP9.86□□□□□ -0.83
HERC1-202ENST00000558324 ZNF391Q9UJN7 358 aa9.86□□□□□ -0.83
HERC1-202ENST00000558324 CENPVL3A0A0U1RRI6 287 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 ZNF816-ZNF321PA0A0X1KG74 233 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 NKX6-3A6NJ46 265 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 ZNF732B4DXR9 585 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 NDUFB3O43676 98 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 FAHP16930 419 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 OMGP23515 440 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 RASSF2P50749 326 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 RIDAP52758 137 aaKnown RBP9.85□□□□□ -0.83
HERC1-202ENST00000558324 CXCR4P61073 352 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 PRB3Q04118 309 aaPredicted RBP9.85□□□□□ -0.83
HERC1-202ENST00000558324 ZNF829Q3KNS6 432 aaPredicted RBP9.85□□□□□ -0.83
HERC1-202ENST00000558324 SLX4IPQ5VYV7 408 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 PLCXD3Q63HM9 321 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 C12orf73Q69YU5 71 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 STUMQ69YW2 141 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 ZNF322Q6U7Q0 402 aaPredicted RBP9.85□□□□□ -0.83
HERC1-202ENST00000558324 MEPCEQ7L2J0 689 aaKnown RBP9.85□□□□□ -0.83
HERC1-202ENST00000558324 ZDHHC13Q8IUH4 622 aa9.85□□□□□ -0.83
HERC1-202ENST00000558324 SLC35F2Q8IXU6 374 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms