RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 CLEC3BP05452 202 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 STAG3L2P0CL84 134 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 CR2P20023 1033 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 DGKAP23743 735 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 LMO2P25791 158 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 CDKN1AP38936 164 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 RPL34P49207 117 aaKnown RBP9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 CKS1BP61024 79 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 DCAF4L1Q3SXM0 396 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 CLEC12AQ5QGZ9 265 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 APCDD1LQ8NCL9 501 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 DNAJB3Q8WWF6 145 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 PRAP1Q96NZ9 151 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 NDC1Q9BTX1 674 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 HINT2Q9BX68 163 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 SLC46A2Q9BY10 475 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 NMNAT2Q9BZQ4 307 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 MMP17Q9ULZ9 603 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 C13orf42A0A1B0GVH6 325 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 MPZL1O95297 269 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 KLF8O95600 359 aaPredicted RBP9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 TSPAN13O95857 204 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 GAPDHP04406 335 aaKnown RBP9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 LGALS2P05162 132 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 GDF1P27539 372 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 IMPA1P29218 277 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 CSNK1G2P78368 415 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 TMEM177Q53S58 311 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 FAM219AQ8IW50 185 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 OR4L1Q8NH43 312 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 TBC1D29Q9UFV1 150 aa9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 CGGBP1Q9UFW8 167 aaPredicted RBP9.79□□□□□ -0.84
SEMA4B-204ENST00000558065 SERINC4A6NH21 518 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 B4DEV8 164 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CPSF6Q16630 551 aaKnown RBP eCLIP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 OR4P4Q8NGL7 312 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 IL22RA2Q969J5 263 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 SLC25A18Q9H1K4 315 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 HINT3Q9NQE9 182 aaKnown RBP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 UQCR10Q9UDW1 63 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 PPP1R3CQ9UQK1 317 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 FFAR2O15552 330 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 IGLC2P0DOY2 106 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 IGLC3P0DOY3 106 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CALCBP10092 127 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CX3CR1P49238 355 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 TAS2R43P59537 309 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 SCAPQ12770 1279 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 SRSF7Q16629 238 aaKnown RBP eCLIP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 MPV17LQ2QL34 196 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 COMMD2Q86X83 199 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 OR2AJ1Q8NGZ0 328 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CCDC74AQ96AQ1 378 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 LINC00615Q96LM1 132 aaPredicted RBP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CABLES2Q9BTV7 478 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 TMEM121BQ9BXQ6 578 aaPredicted RBP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 INPP5EQ9NRR6 644 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 PADI3Q9ULW8 664 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 DAPL1A0PJW8 107 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 M0QYG6 137 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 ZNF157P51786 506 aaPredicted RBP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 TLE3Q04726 772 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 ZFP36L1Q07352 338 aaKnown RBP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 PIN1Q13526 163 aaPredicted RBP9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 FAM71F2Q6NXP2 309 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CYB561D1Q8N8Q1 229 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 OR4K1Q8NGD4 311 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 OR4D6Q8NGJ1 314 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 TMEM9BQ9NQ34 198 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 BET1LQ9NYM9 111 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 ARL5AQ9Y689 179 aa9.78□□□□□ -0.84
SEMA4B-204ENST00000558065 CD55P08174 381 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 ARAFP10398 606 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 LAMP2P13473 410 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 MLC1Q15049 377 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 DNM1P34Q6PK57 102 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 HFE2Q6ZVN8 426 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 SYT12Q8IV01 421 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 BATF2Q8N1L9 274 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 TMEM256Q8N2U0 113 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 OR5AR1Q8NGP9 310 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 AQP3Q92482 292 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 RASL10BQ96S79 203 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 TMEM140Q9NV12 185 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 GJD2Q9UKL4 321 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 SCN5AQ14524 2016 aa9.77□□□□□ -0.84
SEMA4B-204ENST00000558065 LEFTY1O75610 366 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 BLKP51451 505 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 IL13RA1P78552 427 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 TMEM249Q2WGJ8 235 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 ACTL10Q5JWF8 245 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 RNF219Q5W0B1 726 aaPredicted RBP9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 FAM71E1Q6IPT2 247 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 CLEC18BQ6UXF7 455 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 Q6ZN92 141 aa9.77□□□□□ -0.85
SEMA4B-204ENST00000558065 DEFB128Q7Z7B8 93 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms