RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SLC17A7Q9P2U7 560 aa2.89□□□□□ -1.95
CHD8-212ENST00000557329 RPUSD1Q9UJJ7 312 aaKnown RBP2.89□□□□□ -1.95
CHD8-212ENST00000557329 CHMP2BQ9UQN3 213 aa2.89□□□□□ -1.95
CHD8-212ENST00000557329 NSG2Q9Y328 171 aa2.89□□□□□ -1.95
CHD8-212ENST00000557329 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
CHD8-212ENST00000557329 DOCK11Q5JSL3 2073 aa2.89□□□□□ -1.95
CHD8-212ENST00000557329 A0A1B0GW55 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ZNF716A6NP11 495 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 TRIM49D1C9J1S8 452 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 H0YIV9 168 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 M0R3G1 203 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ZNF264O43296 627 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 UPK3AO75631 287 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 SEMA3DO95025 777 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 RAB36O95755 333 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 HLA-HP01893 362 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 FGGP02679 453 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 MT-ND1P03886 318 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ANXA4P09525 319 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4L2P0CJ85 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4L3P0CJ86 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4L5P0CJ88 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4L6P0CJ89 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4L7P0CJ90 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 CD28P10747 220 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 MLNP12872 115 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 CCL2P13500 99 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 RPS2P15880 293 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 ZNF14P17017 642 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 UQCRC2P22695 453 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 PAX7P23759 505 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 SPRP35270 261 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 GLRXP35754 106 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 SLC1A6P48664 564 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 NPY4RP50391 375 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ARFIP1P53367 373 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 AQP5P55064 265 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 NDUFV3P56181 108 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 KLF3P57682 345 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 FGF12P61328 243 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 SLC35A1P78382 337 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 MRPS11P82912 194 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 CD300CQ08708 224 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 RBBP4Q09028 425 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 C1DQ13901 141 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 CEACAM7Q14002 265 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 PDK3Q15120 406 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 PPP1R7Q15435 360 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 OR7A5Q15622 319 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 LY6EQ16553 131 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 GSG1Q2KHT4 349 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ARHGAP11BQ3KRB8 267 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ATP6AP1LQ52LC2 224 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 TEX35Q5T0J7 233 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 C9orf66Q5T8R8 295 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 PRAMEF8Q5VWM4 474 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 PRAMEF7Q5VXH5 474 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4L9Q6RFH8 374 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 BTNL8Q6UX41 500 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 UNQ9370/PRO34162Q6UXP9 181 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 KRT77Q7Z794 578 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 FAM219AQ8IW50 185 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 CTAGE3PQ8IX95 158 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 KDM8Q8N371 416 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 SPICQ8N5J4 248 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ZSCAN4Q8NAM6 433 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 OR5W2Q8NH69 310 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 OCC1Q8TAD7 63 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 C16orf78Q8WTQ4 265 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 RNF138Q8WVD3 245 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 UBLCP1Q8WVY7 318 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 MAIP1Q8WWC4 291 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 GEMIN6Q8WXD5 167 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 BCL2L2Q92843 193 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 CDS1Q92903 461 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 LHX4Q969G2 390 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 MAGOHBQ96A72 148 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 DDIT4LQ96D03 193 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ERP27Q96DN0 273 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 BPIFA3Q9BQP9 254 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 IQCGQ9H095 443 aaKnown RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 GLIPR2Q9H4G4 154 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ZNF385DQ9H6B1 395 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 FNDC4Q9H6D8 234 aaPredicted RBP2.88□□□□□ -1.95
CHD8-212ENST00000557329 NMRAL1Q9HBL8 299 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 GPR173Q9NS66 373 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 ACOXLQ9NUZ1 547 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 SLCO1C1Q9NYB5 712 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 VPS29Q9UBQ0 182 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 DUX4Q9UBX2 424 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 FLVCR1Q9Y5Y0 555 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 NPTNQ9Y639 398 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 POMT1Q9Y6A1 747 aa2.88□□□□□ -1.95
CHD8-212ENST00000557329 IGHV3-64DA0A0J9YX35 117 aa2.87□□□□□ -1.95
CHD8-212ENST00000557329 A0A0U1RQK1 487 aa2.87□□□□□ -1.95
CHD8-212ENST00000557329 SYCE1LA8MT33 242 aa2.87□□□□□ -1.95
CHD8-212ENST00000557329 PRSS46E5RG02 174 aa2.87□□□□□ -1.95
CHD8-212ENST00000557329 PDLIM1O00151 329 aa2.87□□□□□ -1.95
CHD8-212ENST00000557329 EIF1BO60739 113 aaKnown RBP2.87□□□□□ -1.95
CHD8-212ENST00000557329 CLIC3O95833 236 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms