RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ETAA1Q9NY74 926 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 MALT1Q9UDY8 824 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 OR5V1Q9UGF6 321 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 NUFIP1Q9UHK0 495 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 MCTS1Q9ULC4 181 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 TBC1D24Q9ULP9 559 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 PCDHGA9Q9Y5G4 932 aaKnown RBP3.89□□□□□ -1.79
SRP54-212ENST00000556992 FLVCR1Q9Y5Y0 555 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 LHFPL6Q9Y693 200 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CACNA1EQ15878 2313 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 TEX15Q9BXT5 2789 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 SDK1Q7Z5N4 2213 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CABIN1Q9Y6J0 2220 aa3.89□□□□□ -1.79
SRP54-212ENST00000556992 CROCCQ5TZA2 2017 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TMEM131Q92545 1883 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TRAV8-7A0A075B6U6 113 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 A0A0A6YYH2 397 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 IGHV3-15A0A0B4J1V0 119 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 A0A0U1RQV5 110 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 A0A1B0GTI1 187 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 FAM240BA0A1B0GVZ2 78 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 LOC107986453A0A1B0GWG9 222 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 METTL21EPA6NDL7 271 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 NAP1L6A6NFF2 107 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 A6NJ64 397 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 FAM166BA8MTA8 275 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 H0YC42 278 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GABARAPH6UMI1 98 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 P2RY10O00398 339 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SLC17A2O00624 439 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 RER1O15258 196 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 EEF1E1O43324 174 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 LYRM1O43325 122 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 XRCC3O43542 346 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ORC5O43913 435 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 MTRF1O75570 445 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 SCGNO76038 276 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 FARS2O95363 451 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 F10P00742 488 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TTRP02766 147 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ALDOBP05062 364 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 YES1P07947 543 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ACSM4P0C7M7 580 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 PSKH1P11801 424 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ARSBP15848 533 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SPNP16150 400 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ZNF708P17019 499 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 IGFBP3P17936 291 aaPredicted RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 ADRA2CP18825 462 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 KLK2P20151 261 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 RAB3AP20336 220 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 HLA-DMAP28067 261 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 HTR2CP28335 458 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 BDKRB2P30411 391 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GNALP38405 381 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 DDOSTP39656 456 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 MAGEA5P43359 124 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 MAGEB1P43366 347 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 LHX2P50458 406 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TNFSF10P50591 281 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 NOVA1P51513 510 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 CCL11P51671 97 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TPTEP56180 551 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 CLDN18P56856 261 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 BTG1P62324 171 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GALK2Q01415 458 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SRYQ05066 204 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 MFGE8Q08431 387 aaPredicted RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 SCRN3Q0VDG4 424 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SNTB2Q13425 540 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 P2RY14Q15391 338 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TGIF1Q15583 401 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ZNF766Q5HY98 468 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ELFN2Q5R3F8 820 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 C1orf100Q5SVJ3 147 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TMEM69Q5SWH9 247 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GLYATL3Q5SZD4 288 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 AGAP6Q5VW22 663 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OTPQ5XKR4 325 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ABLIM2Q6H8Q1 611 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ANKRD16Q6P6B7 361 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 DRAM2Q6UX65 266 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 CFAP77Q6ZQR2 320 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GALNTL5Q7Z4T8 443 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 DPPA2Q7Z7J5 298 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 MCEMP1Q8IX19 187 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 CADM3Q8N126 398 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 FAM109AQ8N4B1 249 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SLC22A24Q8N4F4 322 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TOMM5Q8N4H5 51 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TMEM251Q8N6I4 163 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ZNF283Q8N7M2 679 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR1M1Q8NGA1 313 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR52H1Q8NGJ2 320 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR51A4Q8NGJ6 313 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR6M1Q8NGM8 313 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR10S1Q8NGN2 331 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR10AC1Q8NH08 325 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SYNPRQ8TBG9 265 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 OR51E1Q8TCB6 317 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms